Table 1 SD-ARGs expression levels in EAC and normal tissue
From: Profiles of autophagy-related genes in esophageal adenocarcinoma
gene | normal | EAC | logFC | P-value | FDR |
|---|---|---|---|---|---|
HDAC1 | 21.783 | 44.624 | 1.035 | 0.000 | 0.002 |
BCL2L1 | 20.050 | 41.717 | 1.057 | 0.000 | 0.002 |
CASP1 | 4.147 | 10.044 | 1.276 | 0.003 | 0.010 |
GABARAPL1 | 21.688 | 8.234 | −1.397 | 0.003 | 0.011 |
ITGB4 | 54.149 | 115.313 | 1.091 | 0.009 | 0.023 |
NKX2–3 | 0.702 | 0.241 | −1.543 | 0.000 | 0.002 |
TNFSF10 | 10.653 | 24.494 | 1.201 | 0.004 | 0.014 |
APOL1 | 21.168 | 42.513 | 1.006 | 0.006 | 0.018 |
CXCR4 | 8.710 | 24.320 | 1.481 | 0.022 | 0.047 |
BNIP3 | 6.195 | 2.255 | −1.458 | 0.008 | 0.022 |
VMP1 | 15.927 | 39.030 | 1.293 | 0.000 | 0.001 |
HSP90AB1 | 263.026 | 666.701 | 1.342 | 0.000 | 0.001 |
RGS19 | 2.514 | 6.916 | 1.460 | 0.000 | 0.001 |
SPHK1 | 1.984 | 4.477 | 1.174 | 0.014 | 0.033 |
FADD | 4.183 | 8.494 | 1.022 | 0.001 | 0.006 |
PPP1R15A | 17.157 | 35.799 | 1.061 | 0.005 | 0.015 |
BIRC5 | 1.741 | 10.314 | 2.566 | 0.000 | 0.000 |
IL24 | 0.379 | 2.488 | 2.715 | 0.000 | 0.002 |
ATIC | 10.788 | 24.286 | 1.171 | 0.000 | 0.003 |
IRGM | 0.092 | 0.030 | −1.626 | 0.004 | 0.013 |
VEGFA | 7.275 | 19.819 | 1.446 | 0.000 | 0.002 |
PRKN | 1.540 | 0.339 | −2.185 | 0.000 | 0.000 |
ITPR1 | 6.263 | 1.937 | −1.693 | 0.010 | 0.025 |
DDIT3 | 7.140 | 17.326 | 1.279 | 0.000 | 0.002 |
BAX | 5.593 | 15.299 | 1.452 | 0.000 | 0.001 |
BAK1 | 10.677 | 22.012 | 1.044 | 0.001 | 0.004 |
IKBKE | 3.508 | 7.066 | 1.010 | 0.005 | 0.017 |
CDKN2A | 1.718 | 10.973 | 2.675 | 0.001 | 0.003 |
BID | 3.102 | 7.882 | 1.345 | 0.000 | 0.001 |
ITGA3 | 14.242 | 36.355 | 1.352 | 0.000 | 0.002 |