Skip to main content

Table 1 RNA-Seq read counts and mapping statistics. Ctrl (Control) and miR-29a OE (overexpressing) represent hPSCs transfected with Control and miR-29a mimics respectively. R1, R2 and R3 are the three experimental replicates

From: Global targetome analysis reveals critical role of miR-29a in pancreatic stellate cell mediated regulation of PDAC tumor microenvironment

Sample ID Total Reads Mapped Reads Mapped High Quality Reads Read Mapping Ratio Percentage mapped to gene
hPSC Ctrl R1 38,372,969 35,691,075 35,333,674 92.07% 90.27
hPSC Ctrl R2 25,288,719 22,628,590 22,389,149 88.53% 90.09
hPSC Ctrl R3 18,759,093 16,958,204 16,698,047 89.01% 92.21
hPSC miR-29a-OE R1 36,899,783 34,288,605 33,965,913 92.05% 90.89
hPSC miR-29a-OE R2 20,971,993 18,594,180 18,318,771 87.35% 91.59
hPSC miR-29a-OE R3 33,726,399 29,480,256 29,128,167 86.37% 90.30