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Table 2 Descriptive statistics of concordance and LME analysis for all genes quantified by wtRNAseq in FFPE versus FF samples. Median values with median absolute deviation in brackets

From: The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues

KitConcordance analysisLME modelReplicates
CCCRBiasBiasVarianceDifference
N0.629 (0.291)0.856 (0.122)0.778 (0.239)0.269 (0.605)0.123 (0.132)0.133 (0.097)
Q0.659 (0.266)0.859 (0.116)0.810 (0.206)0.229 (0.561)0.118 (0.129)0.177 (0.106)
R0.646 (0.278)0.863 (0.113)0.793 (0.226)0.192 (0.619)0.116 (0.127)0.216 (0.124)