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Table 3 A: DBN results for the RNA-Seq data set. B: SVM results for the RNA-Seq data set

From: Comparing biological information contained in mRNA and non-coding RNAs for classification of lung cancer patients

A.

  

DBN

DBN and SVM

Model

Architecture

A %

TPR %

TNR %

A %

TPR %

TNR %

DBN + Bprop

A-500-250-100-1

95.48±0.25

98.06±0.40

92.90±0.36

94.13±0.27

97.58±0.27

91.94±0.34

DBN + Bprop

A-100-1

95.65±0.13

97.90±0.25

93.39±0.16

94.19±0.11

95.16±0.50

93.23±0.22

DBN + Rprop

A-5-10-1

95.73±0.17

98.39±0.50

93.06±0.34

95.89±0.08

98.39±0.50

93.39±0.16

DBN + Rprop

A-50-1

95.16±0.50

98.39±0.50

91.94±0.50

95.97±0.50

98.39±0.50

93.55±0.50

Task: AC vs N; non-coding, A=3124

DBN + Bprop

A-2000-1000-500-1

96.77±0.50

100±0.50

93.55±0.50

95.16±0.50

96.94±0.16

93.39±0.16

DBN + Bprop

A-100-1

95.97±0.50

100±0.50

91.94±0.50

95.48±0.13

97.42±0.26

93.55±0.50

DBN + Rprop

A-5-10-1

96.05±0.22

98.39±0.50

93.71±0.45

96.45±0.13

98.06±0.22

94.84±0.22

DBN + Rprop

A-50-1

94.35±0.50

100±0.50

88.71±0.50

95.48±0.13

98.39±0.50

92.58±0.26

B.

  

Radial

Linear

Data

Features

A %

TPR %

TNR %

A %

TPR %

TNR %

Protein-coding

12360

93.66±0.81

92.66±0.87

94.66±0.91

93.00±0.89

90.00±0.89

96.00±0.85

Non-coding

3124

91.41±0.97

88.00±0.99

94.83±0.56

93.91±0.89

90.50±0.73

97.33±0.72

  1. The best results are shown in bold