Table 3 lncRNAs with potential key role in the colorectal adenoma-carcinoma transition
Overlapping lncRNAs in the CRC vs. N & Ad vs. N comparisons | ||||
HTA 2.0 ID | Annotation | lncRNA name | log2FC (Ad vs. N) | log2FC (CRC vs. N) |
TC03003192.hg.1 | LINC02023 | Long intergenic non-protein coding RNA 2023 | -2.387** | -2.960*** |
TC03001968.hg.1 | LINC02023 | Long intergenic non-protein coding RNA 2023 | -2.284** | -2.886*** |
TC14000678.hg.1 | MEG8 | Maternally expressed 8 | -1.982** | -1.028* |
TC04000172.hg.1 | AC092834.1 | unnamed | -1.610*** | -1.711** |
TC04001939.hg.1 | AC092834.1 | unnamed | -1.546*** | -1.664** |
TC01005699.hg.1 | AL365361.1 | unnamed | -1.318* | -1.558** |
TC12002119.hg.1 | LINC02441 (CRAT8) | Long intergenic non-protein coding RNA 2441 (cervical cancer-associated transcript 8) | -1.315** | -1.166* |
TC21000464.hg.1 | B3GALT5-AS1 | B3GALT5 antisense RNA 1 | -1.304* | -1.171* |
TC12003163.hg.1 | LINC02441 (CRAT8) | Long intergenic non-protein coding RNA 2441 (cervical cancer-associated transcript 8) | -1.273** | -1.099** |
TC03001242.hg.1 | THRB-IT1 | THRB intronic transcript 1 | -1.150** | -1.326*** |
TC01005698.hg.1 | AL365361.1 | unnamed | -1.122** | -1.240** |
TC06003749.hg.1 | LINC02535 | Long intergenic non-protein coding RNA 2535 | -1.066* | -1.192* |
TC16000386.hg.1 | AC140658.1 / AC142086.4 | unnamed | -1.061* | -1.553* |
TC02002653.hg.1 | AC019330.1 | unnamed | -1.056** | -1.379*** |
TC01001358.hg.1 | LINC01133 | Long intergenic non-protein coding RNA 1133 | -1.000** | -1.033* |
TC08001627.hg.1 | CCAT1 / CASC19 | Colon cancer associated transcript 1 | 3.260*** | 2.837** |
TC08001626.hg.1 | CASC19 | Cancer susceptibility 19 | 2.002*** | 1.607* |
TC05000500.hg.1 | LINC02163 | Long intergenic non-protein coding RNA 2163 | 1.460* | 1.014* |
TC03000170.hg.1 | AC123023.1 | unnamed | 1.145* | 1.803* |
TC07001045.hg.1 | AC021218.1 | unnamed | 1.127** | 1.086** |
Overlapping lncRNAs in the CRC vs. N & CRC vs. Ad comparisons | ||||
HTA 2.0 ID | Annotation | lncRNA name | log2FC (Ad vs. N) | log2FC (CRC vs. N) |
TC20000085.hg.1 | LINC01752 | Long intergenic non-protein coding RNA 1752 | -1.117** | -1.091* |
TC19002012.hg.1 | UCA1 | Urothelial cancer associated 1 | 1.167* | 2.048* |
TC19000279.hg.1 | UCA1 | Urothelial cancer associated 1 | 1.080* | 1.976* |
TC08000748.hg.1 | PCAT1 | Prostate cancer associated transcript 1 | 1.006* | 1.251* |