Gene | Log2 Fold Change | p-value | FDR-adjusted p-value |
---|---|---|---|
Genes differentially expressed in Mesenchymal vs. all other MpBC types | |||
 AQP5 | 10.36 | < 2.22E-16 | < 2.22E-16 |
 IL1A | −3.83 | 1.36E-11 | 2.28E-09 |
 EXTL1 | 9.07 | 6.84E-11 | 7.67E-09 |
 TNFRSF11B | 5.02 | 1.36E-09 | 1.14E-07 |
 FGFBP2 | 6.91 | 2.22E-08 | 1.49E-06 |
 PSG5 | −6.16 | 2.84E-08 | 1.59E-06 |
 CXCL5 | −2.49 | 1.34E-07 | 6.43E-06 |
 CA6 | 21.62 | 2.11E-05 | 8.85E-04 |
 CCL2 | −3.10 | 2.39E-05 | 8.92E-04 |
 IRF1 | −2.48 | 8.46E-05 | 2.84E-03 |
 IFI35 | −2.20 | 1.23E-04 | 3.76E-03 |
 STAT1 | −1.98 | 4.09E-04 | 1.15E-02 |
 TYMP | −2.00 | 5.00E-04 | 1.29E-02 |
 EPSTI1 | −2.51 | 6.65E-04 | 1.40E-02 |
 ICAM1 | −2.42 | 6.29E-04 | 1.40E-02 |
 OAS3 | −1.65 | 6.67E-04 | 1.40E-02 |
 BST2 | −2.30 | 7.25E-04 | 1.43E-02 |
 ARC | 2.43 | 9.32E-04 | 1.74E-02 |
 TAP1 | −2.19 | 1.02E-03 | 1.81E-02 |
 SAMHD1 | −1.76 | 2.34E-03 | 3.93E-02 |
 SYNGR1 | 1.30 | 2.82E-03 | 4.31E-02 |
 TNFRSF10B | −1.47 | 2.76E-03 | 4.31E-02 |
 CXCL11 | −2.64 | 3.29E-03 | 4.60E-02 |
 STC1 | −2.23 | 3.21E-03 | 4.60E-02 |
Genes differentially expressed in Spindle cell vs. all other MpBC types | |||
 SPRR1A | −5.30 | 6.48E-13 | 2.18E-10 |
 SPRR2A | −3.67 | 3.28E-12 | 5.51E-10 |
 SPRR2D | −22.62 | 8.87E-12 | 9.94E-10 |
 AQP5 | 5.73 | 3.26E-11 | 2.74E-09 |
 EXTL1 | 2.98 | 6.86E-11 | 4.61E-09 |
 CXCL6 | 6.08 | 2.27E-09 | 1.27E-07 |
 LY6D | −1.56 | 2.75E-09 | 1.32E-07 |
 KRT4 | −2.64 | 9.36E-09 | 3.93E-07 |
 TFPI2 | 2.98 | 1.17E-08 | 4.37E-07 |
 CXCL5 | 3.10 | 1.61E-07 | 5.41E-06 |
 NEFM | 5.58 | 2.92E-05 | 8.92E-04 |
 IL1B | 2.65 | 7.61E-05 | 2.13E-03 |
 MAOB | 2.57 | 2.80E-04 | 7.25E-03 |
 FN1 | 1.66 | 4.80E-04 | 1.04E-02 |
 CCL2 | 1.53 | 4.94E-04 | 1.04E-02 |
 LEP | −21.29 | 4.51E-04 | 1.04E-02 |
 MMP9 | 2.92 | 5.87E-04 | 1.16E-02 |
 CXCL3 | 2.07 | 9.76E-04 | 1.64E-02 |
 HSPA6 | 1.31 | 9.46E-04 | 1.64E-02 |
 VIPR1 | −2.30 | 9.44E-04 | 1.64E-02 |
 ROR1 | 1.08 | 2.21E-03 | 3.53E-02 |
 OXTR | 1.66 | 2.39E-03 | 3.65E-02 |
 TNFRSF10D | 1.62 | 2.60E-03 | 3.80E-02 |
 DKK1 | 2.42 | 3.30E-03 | 4.62E-02 |
Genes differentially expressed in Squamous vs. all other MpBC types | |||
 AQP5 | −24.83 | < 2.22E-16 | < 2.22E-16 |
 ELF5 | −2.79 | < 2.22E-16 | < 2.22E-16 |
 SPRR1A | 6.65 | 3.37E-12 | 3.77E-10 |
 SPRR2A | 6.30 | 4.54E-12 | 3.81E-10 |
 TF | −3.00 | 1.90E-11 | 1.28E-09 |
 HSP90AA4P | −2.99 | 4.67E-11 | 2.62E-09 |
 CA6 | −8.88 | 1.43E-10 | 6.87E-09 |
 EXTL1 | −19.35 | 2.62E-10 | 1.10E-08 |
 PSG5 | 0.20 | 1.83E-09 | 6.84E-08 |
 GLYATL2 | 3.00 | 7.10E-09 | 2.39E-07 |
 PI3 | 5.49 | 7.14E-08 | 2.18E-06 |
 TCN1 | 3.97 | 3.25E-05 | 8.59E-04 |
 EPGN | 2.68 | 3.32E-05 | 8.59E-04 |
 DHRS9 | 2.21 | 7.43E-05 | 1.78E-03 |
 SPRR2D | 11.54 | 1.09E-04 | 2.44E-03 |
 SLC47A2 | 4.33 | 1.52E-04 | 3.19E-03 |
 DSCAM | −23.49 | 1.79E-04 | 3.53E-03 |
 ID4 | −2.93 | 2.20E-04 | 4.11E-03 |
 ALDH3B2 | 3.18 | 2.89E-04 | 5.12E-03 |
 CITED1 | 3.80 | 3.23E-04 | 5.43E-03 |
 EEF1A2 | 3.03 | 4.19E-04 | 6.40E-03 |
 CCL20 | 2.22 | 4.13E-04 | 6.40E-03 |
 C12orf39 | 2.70 | 5.40E-04 | 7.89E-03 |
 STEAP4 | 2.28 | 6.83E-04 | 9.56E-03 |
 PPL | 2.03 | 7.28E-04 | 9.79E-03 |
 NEFM | −5.96 | 9.26E-04 | 1.20E-02 |
 HAS2 | −2.14 | 1.18E-03 | 1.47E-02 |
 LCE3D | 4.05 | 1.26E-03 | 1.52E-02 |
 CDRT1 | 2.92 | 1.60E-03 | 1.85E-02 |
 PTHLH | 2.48 | 1.74E-03 | 1.88E-02 |
 PRSS22 | 1.99 | 1.72E-03 | 1.88E-02 |
 ALDH1A1 | 1.67 | 2.01E-03 | 2.11E-02 |
 TNFAIP2 | 1.41 | 2.30E-03 | 2.35E-02 |
 LEP | 8.40 | 2.94E-03 | 2.91E-02 |
 ELF3 | 2.34 | 4.25E-03 | 4.08E-02 |
 GRHL3 | 2.08 | 4.82E-03 | 4.50E-02 |