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Fig. 3 | BMC Cancer

Fig. 3

From: Distinct signatures of lung cancer types: aberrant mucin O-glycosylation and compromised immune response

Fig. 3

Soft-clustering across lung cancer stages of tumor progression. Each cluster describes an expression pattern in the dataset through the four stages of cancer i.e. stages I, II, III and IV. Blue and purple lines correspond to genes with high cluster membership value (i.e., m > 0.56). a Table with the genes belonging to each cluster and their m value is reported in our Github repository. The LUAD (a) and LUSC (c) clusters are showed along with the corresponding dotplots (b and d, respectively) for the top enriched pathways for each cluster. In the dotplots, the plots are colored according to the p-values from blue (high p-values and low enrichment) to red (low p-values and high enrichment). The cluster plots have been generated with the R/Bioconductor package Mfuzz version 2.36.0

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