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Table 2 Primers (5′ → 3′) and hydrolysis probes for RT-qPCR with the use of SYBR Green and TaqMan assays

From: Regulation of human chorionic gonadotropin beta subunit expression in ovarian cancer

 

Gene

Forward primer

Reverse primer

Hydrolysis probe

SYBR Green

SP1

tgaaggaaggggctcggggg

ccaggggcaaagtgcccaca

n/a

SP3

caggatgtggtaaagtctatgg

cttctcacctgtatgtgttcttc

n/a

TFAP2A

gctgcctcaccagctgtcgg

acagggacacggggcctttct

n/a

HPRT

tgaagagctattgtaatgaccagt

caaatccaacaaagtctggc

n/a

TaqMan

CGB1–2 a

ggtccgctgactcyggc b

cagcagcagcccctttgac

6FAM-tcactccctgtctcactcccccacg-BBQ

CGB3–9 a

gtgtcsagctcacyccagcatccta b

agcagcccctggaacatct

6FAM-ccgaggtytaaagccaggtacacsaggc-BBQ

HPRT

Human HPRT Gene Assay Cat. No. 05 046 157 001 (Roche Diagnostics, Mannheim, Germany)

  1. a CGB3–9 and CGB1–2 hydrolysis probes were designed and manufactured by Tib Molbiol (Berlin, Germany); b degenerated base code: S-G/C; Y-C/T