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Table 1 Small pathogenic variants of BRCA1 and BRCA2 in 218 familial breast and/or ovarian cancer patients

From: Comprehensive mutation detection of BRCA1/2 genes reveals large genomic rearrangements contribute to hereditary breast and ovarian cancer in Chinese women

Gene

Mutation

AA change

ClinVar

No. of patient

Tumor type (age Dx)

IHC of BC

History of BC and OC (age Dx)

Other cancers in the family (age Dx)

BRCA1

c.223G > T

p.Glu75Ter

No

1

IDC (R 44, L 54)

ER−/PR−/HER2-

S OC(52)

PA EC, PA LC, MU GC

c.1209delT

p.Glu404Asnfs

No

1

IDC (47), OC, TC

ER+/PR+/HER2-

M OC(52), MA OC(54)

 

c.1465G > T

p.Glu489Ter

Yes

1

IDC (51)

ER−/PR−/HER2-

S OC(52) and BC(58)

 

c.1945G > T

p.Glu649Ter

Yes

1

IDC (36)

ER−/PR−/HER2-

M BC(58)

 

c.2110_2111delAA

p.Asn704Cysfs

Yes

2

IDC (55)

ER−/PR−/HER2-

M BC(57)

 
    

IDC (68)

ER−/PR−/HER2-

S OC, D OC(40)

 

c.3266delA

p.Leu1089Cysfs

Yes

1

IDC (62)

ER−/PR−/HER2-

S OC(45)

S LC(65),

c.3295delC

p.Pro1099Leufs0

No

1

IDC (29)

ER−/PR−/HER2-

S BC(40)

 

c.3780_3781delAG

p.Leu1260Phefs

No

2

OC (57)

ND

M BC(58)

S GbC(70)

    

IDC (39), OC (44)

NA

MA BC(42), MA BC(33)

 

c.4063_4066delAATC

p.Asn1355Lysfs

No

1

IDC (40)

ER+/PR+/HER2-

M BC(46)

 

c.4065_4068delTCAA

p.Asn1355Lysfs

Yes

2

IDC (38), OC (45)

ER−/PR−/HER2-

M BC (69)

MA EC

    

IDC (50)

ER−/PR−/HER2-

S BC

P GC

c.5154G > A

p.Trp1718Ter

Yes

2

IDC(35)

ER−/PR−/HER2-

S BC(40)

F BT

    

IDC (41)

ER−/PR−/HER2-

S BC(45)

M EC(69), MA RC

c.5161C > T

p.Gln1721Ter

Yes

1

IDC (32)

ER−/PR−/HER2-

S BC(L 35, R 37), M OC(47)

 

c.5173insA

p.Glu1725Argfs

Yes

1

IDC (42)

ER−/PR−/HER2-

S BC(48), MA BC(48)

M LC(51)

c.5251C > T

p.Arg1751Ter

Yes

1

IDC (47)

ND

S DCIS(57)

 

c.5467 + 1G > A

–

Yes

1

IDC (31)

ER+/PR+/HER2+

S BC(41), S BC(45), MA BC(51)

 

c.5468-1_5474del GCAATTGG

–

No

2

IDC (41)

ER−/PR−/HER2-

S BC(52), S OC(47)

M EC(77), F LuC(81)

    

IDC (36)

ER−/PR−/HER2-

S BC(L 38, R 44), MA BC(48)

MA EC(50)

c.5470_5477del ATTGGGCA

p.Ile1824Aspfs

Yes

5

IDC (36)

ER−/PR−/HER2-

S BC (L 37, R 39)

 
    

IDC (40)

ER−/PR−/HER2-

M BC(44)

 
    

IDC (58)

ER−/PR−/HER2-

M OC(55), MA BC(56)

 
    

IDC (L 22, R 33), TC (22)

ER−/PR−/HER2-

M BC(47), MGM BC(49), MA BC(33), MA OC(42)

MA RC(47)

    

IDC (49)

ER−/PR−/HER2-

S BC(52), PA BC

 

BRCA2

c.-39-1_-39delGA

–

Yes

1

IDC (46)

ER+/PR+/HER2+

S BC(48)

 

c.469_473delAAGTC

p.Lys157Serfs

No

1

IDC (46)

ER−/PR+/HER2-

S BC(L 47, R 49)

S CC(50), F EsC(51), B EsC(64)

c.470_474del AGTCA

p.Lys157Serfs

Yes

1

ILC (31)

ER+/PR+/HER2-

M BC(58)

 

c.755_758delACAG

p.Asp252Valfs

Yes

1

IDC (48)

ER+/PR+/HER2-

M OC(68)

 

c.784delG

p.Ala262Glnfs

No

1

IDC (43)

ER+/PR+/HER2-

S BC(43), PA BC(50)

F EsC(57), FU PC(56)

c.3109C>T

p.Gln1037Ter

Yes

2

IDC (L 39, R 47)

ER+/PR+/HER2-

M BC (39)

 
    

IDC (34)

ER+/PR+/HER2-

PA BC(51)

PA GC(70), PU EsC (59)

c.3189_3192delGTCA

p.Ser1064Leufs

Yes

1

IDC (55)

ER+/PR+/HER2-

S BC(55)

 

c.3596_3599delACTG

p.Asp1199Valfs

Yes

1

IDC (44)

NA

S BC(46), M BC(60)

 

c.4487delC

p.Pro1496Glnfs

No

1

IDC (37)

ER−/PR+/HER2-

S BC(47), MS BC(41)

MA TC(51), MA TC(55), MS TC(36)

c.5495delC

p.Ser1832Leufs

No

1

IDC (41)

ER−/PR+/HER2-

S BC(43)

 

c.5682C > G

p.Tyr1894Ter

Yes

4

ILC (32)

ER+/PR+/HER2-

PA BC(45), PA BC(R 42, L 46)

 
    

MBC (42)

NA

PGF BC(66)

 
    

ILC (68)

ER+/PR+/HER2-

PA BC(60)

 
    

ILC (61)

ER+/PR+/HER2-

S BC(51)

 

c.6141 T > A

p.Tyr2047Ter

No

1

IDC (35)

NA

S BC(39), MGM BC(61), MS BC(50)

S LuC (52), MU LC(66)

c.6359C > G

p.Ser2120Ter

Yes

1

ILC (R 36, L 51), EC (55)

ER+/PR+/HER2-

M OC(76), MA BC(70)

 

c.7588C > T

p.Gln2530Ter

No

1

IDC (43)

ER+/PR+/HER2+

M BC(63)

 
  1. AA amino acid, Dx diagnosis, IHC immunohistochemistry, IDC invasive ductal carcinoma, ILC invasive lobular carcinoma, MBC medullary breast carcinoma, L left, R right, BC breast cancer, OC ovarian cancer, LC liver cancer, EC endometrial carcinoma, LuC lung cancer, BT brain tumor, RC rectal cancer, DCIS ductal carcinoma in situ, GbC Gallbladder cancer, GC gastric cancer, TC thyroid cancer, CC Colon cancer, EsC Esophagus cancer, PA prostate cancer, M mother, S sister, MS maternal sister, PA paternal aunt, MGM maternal grandmother, F father, MU maternal uncle, FU father uncle, MA maternal aunt, D daughter, PGF paternal grandfather, B brother, PU paternal uncle, ND not done, NA not available