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Table 2 Detail description of 41 highly frequent 5′ isomiRs in 100 generated predictor sets

From: Tumor classification and biomarker discovery based on the 5’isomiR expression level

5’isomiR ID

Chromosome

Strand

Start site

Corresponding miRNA ID

Frequency in 100 runs

Canonical seed region?

313

Chr1

+

209,432,166

hsa-miR-205-5p

88

Y

698

Chr6

+

52,144,401

hsa-mir-206

85

Y

233

Chr7

27,169,550

hsa-mir-196b-5p

75

N

121

Chr2

+

176,150,330

hsa-miR-10b-5p

40

N

39

Chr2

+

176,150,329

hsa-miR-10b-5p

36

Y

151

Chr17

48,579,926

hsa-miR-10a-5p

32

Y

301

Chr2

219,001,669

hsa-miR-375

24

Y

193

Chr2

219,001,670

hsa-miR-375

24

N

317

Chr2

219,001,671

hsa-miR-375

23

N

103

Chr3

+

189,829,974

hsa-mir-944

21

N

350

Chr2

+

176,150,331

hsa-miR-10b-5p

20

N

529

Chr1

220,117,937

hsa-miR-215-5p

18

N

275

Chr17

48,579,925

hsa-miR-10a-5p

18

N

506

Chr3

+

189,829,975

hsa-mir-944

16

Y

207

Chr5

149,062,395

hsa-miR-584-5p

16

N

188

Chr12

+

6,963,742

hsa-miR-200c-3p

15

Y

594

Chr12

+

62,603,694

hsa-let-7i-5p

14

N

119

Chr11

64,891,426

hsa-miR-194-5p

14

N

884

ChrX

+

136,550,892

hsa-miR-934

13

Y

297

ChrX

151,958,652

hsa-miR-224-5p

13

N

264

Chr17

1,713,934

hsa-miR-22-3p

13

N

208

Chr17

48,579,928

hsa-miR-10a-5p

13

N

91

Chr6

71,403,576

hsa-miR-30a-3p

12

N

90

Chr17

+

31,560,016

hsa-miR-193a-5p

12

Y

854

ChrX

+

136,550,928

hsa-mir-934

12

N

449

Chr11

64,891,390

hsa-miR-194-3p

12

N

372

Chr14

101,560,347

hsa-miR-1247-3p

12

N

247

Chr1

207,802,474

hsa-miR-29b-3p

12

N

124

Chr5

+

149,428,977

hsa-miR-143-3p

12

N

120

Chr1

220,118,228

hsa-miR-194-5p

12

N

572

Chr20

+

62,564,971

hsa-miR-133a-3p

11

N

475

Chr2

+

176,150,328

hsa-miR-10b-5p

11

N

429

Chr20

+

62,554,351

hsa-miR-1-3p

11

Y

392

Chr9

21,512,179

hsa-miR-31-5p

11

N

37

Chr6

71,403,617

hsa-miR-30a-5p

11

N

358

Chr7

129,774,987

hsa-miR-183-5p

11

N

324

Chr7

129,770,466

hsa-miR-182-5p

11

N

316

Chr1

+

1,167,124

hsa-miR-200b-5p

11

Y

248

Chr7

130,877,491

hsa-miR-29b-3p

11

N

232

Chr1

+

1,167,160

hsa-miR-200b-3p

11

Y

113

Chr21

+

16,539,101

hsa-miR-99a-5p

11

Y