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Table 1 The 20 most significantly differentially expressed genes

From: Encapsulated miR-200c and Nkx2.1 in a nuclear/mitochondria transcriptional regulatory network of non-metastatic and metastatic lung cancer cells

Gene ID Gene Locus Treated FPKM Untreated FPKM Log2 Fold Change q_value
XLOC_001070 Mir29b2, Mir29c, mmu-mir-29b-2 1:194938820–195,037,908 426.25 4.19 −6.67 0.00215219
XLOC_034022 H19, Mir675 7:142575528–142,578,143 20.65 568.45 4.78 0.00215219
XLOC_002346 Gp49a, Lilrb4 10:51480631–51,496,613 24.53 0.97 −4.66 0.00215219
XLOC_024975 4:150736119–150,739,106 1.64 0.08 −4.42 0.00215219
XLOC_026432 Car6 4:150187014–150,201,332 3.34 0.18 −4.21 0.00215219
XLOC_036797 Angptl6 9:20868641–20,879,727 28.72 2.07 −3.79 0.00215219
XLOC_013580 AC115005.1, Gm7541 16:8622332–8,624,782 7.85 0.6 −3.7 0.00215219
XLOC_003379 10:79038548–79,046,643 3.34 0.26 −3.67 0.00215219
XLOC_002626 10:82116731–82,122,868 1.48 0.12 −3.62 0.00215219
XLOC_003263 Col13a1 10:61838235–61,979,108 0.78 0.06 −3.61 0.00382174
XLOC_037321 AC163666.1, SNORD50 9:88595218–88,599,516 1.18 13.74 3,54 0.00215219
XLOC_028771 Fam71f2 6:29275646–29,290,927 28.77 2.54 −3.5 0.00215219
XLOC_008396 13:14677687–14,682,438 1.26 0.11 −3.5 0.00215219
XLOC_008544 Dcdc2a 13:25056003–25,210,706 1.56 0.14 −3.44 0.023298
XLOC_012908 Krt6a 15:101689931–101,694,307 3.0 31.08 3.37 0.00215219
XLOC_012225 Soat2 15:102150517–102,163,474 10.76 1.04 −3.37 0.00539903
XLOC_019276 Gm14047 2:129364569–129,376,154 6.63 0.67 −3.31 0.0173413
XLOC_003382 10:79048734–79,059,175 1.67 0.17 −3.3 0.00215219
XLOC_002473 Chchd10 10:75935559–75,940,672 62.53 6.36 −3.3 0.00215219
XLOC_036264 2810417H13Rik 9:65828929–65,908,794 4.88 47.75 3.29 0.0105894
  1. Treated and untreated columns show group average FPKM values. FPKM is a unit of measurement of gene expression (fragments per kilobase of transcript per million mapped reads). Transcripts with the highest fold change between groups are shown at the top of the table. The fold change is the log2-fold change of FPKM between the treated and untreated groups. q-values shown are p-values that have been adjusted using the Benjamini-Hochberg false discovery rate (FDR) approach to correct for multiple testing. As a general guide, fold changes with q-values below 0.05 may be considered significant