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Table 1 Data source and statistics of PDXliver database. Multiple PDX models from the same patient were counted only once

From: PDXliver: a database of liver cancer patient derived xenograft mouse models

Data Set Patient Transcriptome Genome Drug treatment Source Reference
patient platform patient platform
DataSet1 46 40 Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) 40 Affymetrix Genome-Wide Human SNP 6.0 Array 21 ZhongShan Hospital unpublished
13 Exome sequencing
DataSet2 65 43 Affymetrix Human Gene Expression Array (GPL15207) 42 Affymetrix Genome-Wide Human SNP 6.0 Array 0 WuXi AppTech [24]
56 Exome sequencing
DataSet3 5 5 RNA sequencing / 5 ZhongShan Hospital unpublished