Fig. 3

Enrichment analysis of differentially expressed genes (DEGs), shown by LYL1 gene status: a significantly enriched pathway analysis in upregulated 993 DEGs; b expression levels of enriched DEGs across LYL1 amplification; and (c) genes in significant gene networks bearing simplified KEGG pathway annotations and grouped process-wise by commonest term prevailing in network (node size defined by degree of interaction)