From: First-decade patient with colorectal cancer carrying both germline and somatic mutations in APC gene
Amplicon | Primer name | Primer sequence | Size (bp) | PCR condition (see Table 2) |
---|---|---|---|---|
APC-E15.1 (with M13 tail) | APC-E15.1 forward | 5′- TGTAAAACGACGGCCAGTTGTGACCTTAATTTTGTGATCTCTTGAT -3′ | 634 | A |
APC-E15.1 reverse | 5′- CAGGAAACAGCTATGACCCCAAACTTCTATCTTTTTCAGAACGA -3′ | |||
APC-E15.2 (with M13 tail) | APC-E15.2 forward | 5′- TGTAAAACGACGGCCAGTCCCAGCTCCTCTTCATCAAGA -3′ | 668 | A |
APC-E15.2 reverse | 5′- CAGGAAACAGCTATGACCTGTTTGGGTCTTGCCCATCTT -3′ | |||
APC-E15.3 (with M13 tail) | APC-E15.3 forward | 5′- TGTAAAACGACGGCCAGTCAGATGAGCAGTTGAACTCTGGAA -3′ | 756 | A |
APC-E15.3 reverse | 5′- CAGGAAACAGCTATGACCCAGCTGATGACAAAGATGATAATGAAC -3′ | |||
APC-E15.4 (with M13 tail) | APC-E15.4 forward | 5′- TGTAAAACGACGGCCAGTCCACTTGCAAAGTTTCTTCTATTAACC -3′ | 708 | A |
APC-E15.4 reverse | 5′- CAGGAAACAGCTATGACCGAAGAACCTGGACCCTCTGAACT -3′ | |||
APC-E15.5 (with M13 tail) | APC-E15.5 forward | 5′- TGTAAAACGACGGCCAGTAATAAAGCACCTACTGCTGAAAAGAGA -3′ | 751 | A |
APC-E15.5 reverse | 5′- CAGGAAACAGCTATGACCTTTTTCCTCCTTGAGCCTCATC -3′ | |||
APC-E15.6 (with M13 tail) | APC-E15.6 forward | 5′- TGTAAAACGACGGCCAGTTCGAATCCCCTCCAAATGAG -3′ | 560 | A |
APC-E15.6 reverse | 5′- CAGGAAACAGCTATGACCAGGCGTGTAATGATGAGGTGAA -3′ | |||
APC-E15.7 (with M13 tail) | APC-E15.7 forward | 5′- TGTAAAACGACGGCCAGTTGATAAGCTCCCAAATAATGAAGATAGAG -3′ | 659 | A |
APC-E15.7 reverse | 5′- CAGGAAACAGCTATGACCTTATACATTCCTGCAACAGGTCATC -3′ | |||
APC-E15.8 (with M13 tail) | APC-E15.8 forward | 5′- TGTAAAACGACGGCCAGTTGTTGAAGATACCCCAGTTTGTT -3′ | 650 | A |
APC-E15.8 reverse | 5′- CAGGAAACAGCTATGACCTTGTCCTGCCTCGAGAGATT -3′ | |||
APC-E15.9 (with M13 tail) | APC-E15.9 forward | 5′- TGTAAAACGACGGCCAGTCAGGGGAGAAAAGTACATTGGA -3′ | 692 | B |
APC-E15.9 reverse | 5′- CAGGAAACAGCTATGACCTCCTTTGGAGGCAGACTCAC -3′ | |||
APC-E15.10 (with M13 tail) | APC-E15.10 forward | 5′- TGTAAAACGACGGCCAGTCAGATGAGCCAACAGAACCTT -3′ | 632 | A |
APC-E15.10 reverse | 5′- CAGGAAACAGCTATGACCTCACTGGATTCTGATGAAGCA -3′ | |||
APC-E15.11 (with M13 tail) | APC-E15.11 forward | 5′- TGTAAAACGACGGCCAGTCGTGAGCACAGCAAACATTC -3′ | 663 | B |
APC-E15.11 reverse | 5′- CAGGAAACAGCTATGACCTTTGCTTGAGCTGCTAGAACTG -3′ | |||
APC-E15.12 (with M13 tail) | APC-E15.12 forward | 5′- TGTAAAACGACGGCCAGTCCCCTGACCAAAAAGGAACT -3′ | 623 | B |
APC-E15.12 reverse | 5′- CAGGAAACAGCTATGACCGAAGTTGGGATGGGATGCTA -3′ |