Skip to main content

Table 2 Validation of microarray results in tumour samples

From: MicroRNA expression patterns in canine mammary cancer show significant differences between metastatic and non-metastatic tumours

microRNA

microarray p-value

RT-qPCR

p-value

Average RT-qPCR repeats, normalized

Control

Benign

Malignant

non-metastatic

Malignant metastatic

let-7c

< 1e-07

0.02892256

2.066592593

1.551592593

0.885092593

0

miR-26b

< 1e-07

0.00001507

1.56060648

0.04060648

−0.57989352

−1.02131944

miR-26a

< 1e-07

0.00003571

1.11365741

0.50621296

−0.58834259

−1.03152778

miR-30a

3.00E-07

0.00367713

−0.09936889

0.71563112

0.08413112

−0.70039334

miR-148a

3.00E-07

0.04282469

0.32479167

0.55945833

−0.50670833

−0.37754167

miR-29c

5.00E-07

0.00019157

0.79212037

0.30412037

−0.25387963

−0.84236111

miR-30c

2.70E-06

0.00133947

0.2615463

0.59621296

0.0315463

−0.88930556

miR-299

5.40E-06

0.04632324

1.899074074

0.425074074

2.399074074

0

miR-10b

6.00E-06

0.01635353

0.9961408

0.07058524

−0.46735921

−0.59936683

miR-30b

1.74E-05

0.00557426

0.61328913

0.43528913

−0.40171087

−0.6468674

  1. one-way ANOVA p-values for microarray results and RT-qPCR results; RT-qPCRs performed for 10 microRNAs on 47 samples (5 controls, 5 benign tumours, 10 malignant non-metastatic tumours and 27 malignant metastatic tumours)