Table 3 Deregulated genes in CD133lo CSCs when compared to CD133hi non-CSCs. List of top 30 genes down-regulated in CD133lo cells
From: In vitro characterization of CD133lo cancer stem cells in Retinoblastoma Y79 cell line
Gene ID | Gene Name | PValueLogRatio | MEAN_LOG2_R\G_RATIO |
|---|---|---|---|
A_24_P938577 | follicular lymphoma variant translocation 1 | 2.31E-04 | −2.61517 |
A_24_P911519 | unknown | 4.63E-05 | −2.62426 |
C12orf12 | coiled-coil glutamate rich protein 1 [Homo sapiens (human)] | 3.55E-14 | −2.62559 |
A_24_P942870 | unknown | 1.29E-02 | −2.68738 |
TSHR | thyroid stimulating hormone receptor [Homo sapiens (human)] | 4.27E-02 | −2.68954 |
A_24_P800363 | AU146536 HEMBB1 Homo sapiens cDNA clone HEMBB1000770 | 2.28E-01 | −2.74867 |
CDH6 | cadherin 6 [Homo sapiens (human)] | 5.85E-02 | −2.74995 |
A_24_P376029 | A_24_P376029 | 1.00E + 00 | −2.77371 |
GFM1 | G elongation factor mitochondrial 1 [Homo sapiens (human)] | 6.18E-02 | −2.79011 |
A_24_P642426 | a_24_P376029 | 5.80E-02 | −2.80546 |
A_32_P849727 | A_24_P642426 | 1.00E + 00 | −2.80911 |
DLX2 | distal-less homeobox 2 [Homo sapiens (human)] | 2.77E-16 | −2.8165 |
A_24_P931377 | A_32_P849727 | 1.56E-18 | −2.8605 |
ROR1 | receptor tyrosine kinase like orphan receptor 1 [Homo sapiens (human)] | 1.17E-06 | −2.86722 |
TFEC | transcription factor EC [Homo sapiens (human)] | 3.05E-02 | −2.87202 |
MITF | melanogenesis associated transcription factor [Homo sapiens (human)] | 4.87E-02 | −2.87412 |
ENST00000328752 |  | 2.47E-06 | −2.91985 |
A_24_P923789 | A_24_P923789 | 2.10E-02 | −2.92733 |
KNG1 | kininogen 1 [Homo sapiens (human)] | 1.33E-04 | −2.96233 |
SCN9A | sodium voltage-gated channel alpha subunit 9 [Homo sapiens (human)] | 1.00E + 00 | −2.99605 |
ENST00000436580 |  | 1.00E + 00 | −3.11519 |
LMOD3 | leiomodin 3 [Homo sapiens (human)] | 1.00E + 00 | −3.13762 |
A_24_P923439 | A_24_P923439 | 9.65E-11 | −3.14399 |
ENST00000481704 |  | 4.02E-06 | −3.15966 |
FGF5 | fibroblast growth factor 5 [Homo sapiens (human)] | 3.19E-01 | −3.25497 |
A_32_P53093 |  | 3.03E-01 | −3.45255 |
CCDC68 | coiled-coil domain containing 68 [Homo sapiens (human)] | 2.63E-20 | −3.50641 |
ENST00000354854 |  | 2.72E-06 | −3.516 |
CXorf57 | chromosome X open reading frame 57 [Homo sapiens (human)] | 6.69E-03 | −3.5772 |
AK000119 |  | 9.79E-04 | −3.67492 |