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Table 3 Deregulated genes in CD133lo CSCs when compared to CD133hi non-CSCs. List of top 30 genes down-regulated in CD133lo cells

From: In vitro characterization of CD133lo cancer stem cells in Retinoblastoma Y79 cell line

Gene ID Gene Name PValueLogRatio MEAN_LOG2_R\G_RATIO
A_24_P938577 follicular lymphoma variant translocation 1 2.31E-04 −2.61517
A_24_P911519 unknown 4.63E-05 −2.62426
C12orf12 coiled-coil glutamate rich protein 1 [Homo sapiens (human)] 3.55E-14 −2.62559
A_24_P942870 unknown 1.29E-02 −2.68738
TSHR thyroid stimulating hormone receptor [Homo sapiens (human)] 4.27E-02 −2.68954
A_24_P800363 AU146536 HEMBB1 Homo sapiens cDNA clone HEMBB1000770 2.28E-01 −2.74867
CDH6 cadherin 6 [Homo sapiens (human)] 5.85E-02 −2.74995
A_24_P376029 A_24_P376029 1.00E + 00 −2.77371
GFM1 G elongation factor mitochondrial 1 [Homo sapiens (human)] 6.18E-02 −2.79011
A_24_P642426 a_24_P376029 5.80E-02 −2.80546
A_32_P849727 A_24_P642426 1.00E + 00 −2.80911
DLX2 distal-less homeobox 2 [Homo sapiens (human)] 2.77E-16 −2.8165
A_24_P931377 A_32_P849727 1.56E-18 −2.8605
ROR1 receptor tyrosine kinase like orphan receptor 1 [Homo sapiens (human)] 1.17E-06 −2.86722
TFEC transcription factor EC [Homo sapiens (human)] 3.05E-02 −2.87202
MITF melanogenesis associated transcription factor [Homo sapiens (human)] 4.87E-02 −2.87412
ENST00000328752   2.47E-06 −2.91985
A_24_P923789 A_24_P923789 2.10E-02 −2.92733
KNG1 kininogen 1 [Homo sapiens (human)] 1.33E-04 −2.96233
SCN9A sodium voltage-gated channel alpha subunit 9 [Homo sapiens (human)] 1.00E + 00 −2.99605
ENST00000436580   1.00E + 00 −3.11519
LMOD3 leiomodin 3 [Homo sapiens (human)] 1.00E + 00 −3.13762
A_24_P923439 A_24_P923439 9.65E-11 −3.14399
ENST00000481704   4.02E-06 −3.15966
FGF5 fibroblast growth factor 5 [Homo sapiens (human)] 3.19E-01 −3.25497
A_32_P53093   3.03E-01 −3.45255
CCDC68 coiled-coil domain containing 68 [Homo sapiens (human)] 2.63E-20 −3.50641
ENST00000354854   2.72E-06 −3.516
CXorf57 chromosome X open reading frame 57 [Homo sapiens (human)] 6.69E-03 −3.5772
AK000119   9.79E-04 −3.67492