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Table 2 Genotype and allele frequencies of ADH1A, ADH1B, ADH1C and ALDH2 gene and association with gastric cancer risk

From: Polymorphisms in ADH1B and ALDH2 genes associated with the increased risk of gastric cancer in West Bengal, India

Genotype

Controls(n-108)

n (%)

Cases (n-105)

n (%)

ORa (95% CI)

p-value

ADH1A

rs1230025

 TT

52 (48.1)

45 (42.9)

1.00

 

 TA

46 (42.6)

57 (54.3)

1.10 (0.55–2.19)

 

 AA

10 (9.3)

3 (2.9)

0.28 (0.05–1.55)

0.284

 TT

52 (48.1)

45 (42.9)

1.00

 

 TA + AA

56 (51.9)

60 (57.1)

0.96 (0.49–1.87)

0.893

 TT + TA

98 (90.7)

102 (97.1)

1.00

 

 AA

10 (9.3)

3 (2.9)

0.27 (0.05–1.44)

0.099

 T allele

69%

70%

1.00

 

 A allele

31%

30%

0.95 (0.63–1.44)

0.819

ADH1B

rs3811802

 TT

62 (57.4)

54 (51.4)

1.00

 

 TC

44 (40.7)

51 (48.6)

1.37 (0.79–2.38)

0.162

 CC

2 (1.9)

0 (0.0)

–

 

 TT

62 (57.4)

54 (51.4)

1.00

 

 CT + TT

46 (42.6)

51 (48.6)

1.32 (0.76–2.29)

0.316

 T allele

78%

76%

1.00

 

 C allele

22%

24%

1.09 (0.70–1.72)

0.697

ADH1B

rs1229982

 CC

78 (72.2)

74 (70.5)

1.00

 

 CA

28 (25.9)

30 (28.6)

0.92 (0.42–2.01)

 

 AA

2 (1.9)

1 (1.0)

0.89 (0.06–13.66)

0.974

 CC

78 (72.2)

74 (70.5)

1.00

 

 CA + AA

30 (27.8)

31 (29.5)

0.91 (0.42–1.99)

0.820

 CC + CA

106 (98.1)

104 (99.0)

1.00

 

 AA

2 (1.9)

1 (1.0)

0.93 (0.06–13.87)

0.957

 C allele

85%

85%

1.00

 

 A allele

15%

15%

1.00 (0.59–1.69)

0.991

ADH1B

rs1229984

 GG

107 (99.1)

104 (99.0)

1.00

 

 GA

1 (0.9)

1 (1.0)

1.44 (0.02–130.3)

0.874

 G allele

100%

100%

1.00

 

 A allele

0%

0%

–

–

ADH1B

rs4147536

 GG

56 (51.9)

62 (59.0)

1.00

 

 GT

41 (38.0)

41 (39.0)

1.03 (0.53–2.00)

 

 TT

11 (10.2)

2 (1.9)

0.22 (0.04–1.12)

0.114

 GG

56 (51.9)

62 (59.0)

1.00

 

 GT + TT

52 (48.1)

43 (41.0)

0.86 (0.46–1.62)

0.636

 GG + GT

97 (89.8)

103 (98.1)

1.00

 

 TT

11 (10.2)

2 (1.9)

0.18 (0.04–0.82)

0.009

 G allele

71%

79%

1.00

 

 T allele

29%

21%

0.66 (0.43–1.03)

0.066

ADH1B

rs17033

 AA

101 (93.5)

85 (81.0)

1.00

 

 AG

7 (6.5)

17 (16.2)

2.38 (0.84–6.75)

0.054

 GG

0 (0.0)

3 (2.9)

–

 

 AA

101 (93.5)

85 (81.0)

1.00

 

 AG + GG

7 (6.5)

20 (19.0)

2.80 (1.02–7.70)

0.039

 A allele

97%

89%

1.00

 

 G allele

3%

11%

3.67 (1.54–8.75)

0.002

ADH1C

rs698

 AA

60 (55.6)

61 (58.1)

1.00

 

 AG

41 (38.0)

34 (32.4)

0.62 (0.30–1.29)

 

 GG

7 (6.5)

10 (9.5)

2.04 (0.53–7.89)

0.189

 AA

60 (55.6)

61 (58.1)

1.00

 

 AG + GG

48 (44.4)

44 (41.9)

0.76 (0.39–1.51)

0.435

 AA + AG

101 (93.5)

95 (90.5)

1.00

 

 GG

7 (6.5)

10 (9.5)

2.40 (0.63–9.10)

0.196

 A allele

75%

74%

1.00

 

 G allele

25%

26%

1.06 (0.69–1.65)

0.778

ALDH2

rs886205

 AA

35 (32.4)

35 (33.3)

1.00

 

 AG

56 (51.9)

45 (42.9)

0.75 (0.34–1.63)

 

 GG

17 (15.7)

25 (23.8)

1.58 (0.59–4.21)

0.255

 AA

35 (32.4)

35 (33.3)

1.00

 

 AG + GG

73 (67.6)

70 (66.7)

0.92 (0.44–1.93)

0.832

 AA + AG

91 (84.3)

80 (76.2)

1.00

 

 GG

17 (15.7)

25 (23.8)

1.89 (0.81–4.43)

0.137

 A allele

58%

55%

1.00

 

 G allele

42%

45%

1.13 (0.77–1.66)

0.518

ALDH2

rs671

 GG

104 (96.3)

88 (83.8)

1.00

 

 GA

4 (3.7)

15 (14.3)

5.04 (1.37–18.57)

0.021

 AA

0 (0.0)

2 (1.9)

  

 GG

104 (96.3)

88 (83.8)

1.00

 

 GA + AA

4 (3.7)

17 (16.2)

5.30 (1.46–19.20)

0.006

 G allele

98%

91%

1.00

 

 A allele

2%

9%

4.20 (1.54–11.46)

0.003

ALDH2

rs968529

 CC

101 (93.5)

101 (96.2)

1.00

 

 CT

7 (6.5)

4 (3.8)

0.36 (0.08–1.73)

0.371

 C allele

97%

98%

1.00

 

 T allele

3%

2%

0.73 (0.23–2.33)

0.592

ALDH2

rs16941667

 CC

104 (96.3)

97 (92.4)

1.00

 

 CT

3 (2.8)

7 (6.7)

3.49 (0.52–23.24)

0.294

 TT

1 (0.9)

1 (1.0)

0.19 (0.00–11.13)

 

 CC

104 (96.3)

97 (92.4)

1.00

 

 CT + TT

4 (3.7)

8 (7.6)

2.03 (0.39–10.60)

0.395

 CC + CT

107 (99.1)

104 (99.0)

1.00

 

 TT

1 (0.9)

1 (1.0)

0.19 (0.00–10.94)

0.408

 C allele

98%

96%

1.00

 

 T allele

2%

4%

1.89 (0.62–5.73)

0.254

  1. aOdds ratio were adjusted for age, sex, BMI, alcohol and smoking status, p value < 0.05 is considered to be statistically significant