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Table 2 DNA methylation rate by BAS analysis

From: Quantitation of DNA methylation in Epstein-Barr virus–associated nasopharyngeal carcinoma by bisulfite amplicon sequencing

  No. CpG NNE (n = 9) Mean ± SD (%) NPC (n = 9) Mean ± SD (%) P-value by t-test Ratio of NPC/NNE (ranka)
CR2 47 5.3 ± 2.6 20.7 ± 11.7 0.004 3.9 (6)
ITGA4 30 3.0 ± 1.1 35.3 ± 24.6 0.004 11.8 (1)
RERG 25 3.9 ± 2.2 35.2 ± 25.0 0.006 9.1 (2)
RRAD 30 7.1 ± 2.5 15.3 ± 9.9 0.038 2.2 (7)
SHISA3 37 2.9 ± 0.7 21.1 ± 15.3 0.007 7.3 (4)
ZNF549 48 4.7 ± 2.1 19.7 ± 13.5 0.010 4.2 (5)
ZNF671 28 4.1 ± 2.0 36.4 ± 20.7 0.002 8.9 (3)
  1. a: rank in descending order