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Table 1 Somatic SNVs and a small insertion detected by WES and WTS

From: Characterization of genetic aberrations in a single case of metastatic thymic adenocarcinoma

    Sequence   Allele frequency
Gene Chr Position Ref Var Coding change WES WTS
APH1A chr1 150,239,812 A T p.L142H 41/133 (30.83%) 161/630 (25.56%)
RNASEL chr1 182,554,694 G C p.H416Q 21/151 (13.91%) 2/15 (13.33%)
GPR124 chr8 37,695,290 T A p.S698T 26/74 (35.14%) 0/35 (0%)
WDR87 chr19 38,384,338 G C  p.L669V 33/177 (18.64%) 0/0 (0%)
ZBTB34 chr9 129,642,990 G A p.G434R 37/160 (23.12%) 0/0 (0%)
PEG10 chr7 94,293,260 G A p.R207H 37/193 (19.17%) 0/2 (0%)
TNFSF15 chr9 117,552,937 A G p.V184A 17/112 (15.18%) 2/2 (100%)
NOL6 chr9 33,464,880 T A p.T926S 16/89 (17.98%) 20/208 (9.61%)
ONECUT1 chr15 53,082,000 G T p.L28M 21/47 (44.68%) 0/0 (0%)
CASKIN1 chr16 2,229,210 A T p.S1298T 4/15 (26.67%) 0/4 (0%)
A3GALT2 chr1 33,772,594 G A p.R266C 7/36 (19.44%) 0/0 (0%)
TENM3 chr4 183,721,259 C T p.R2619C 17/61 (27.87%) 1/3 (33.33%)
GZF1 chr20 23,346,065 C T p.R349C 21/102 (20.59%) 2/9 (22.22%)
MAFA chr8 144,512,176 G A p.T134M 11/44 (25%) 0/3 (0%)
TP53 chr17 7,578,403 C A p.C176F 51/91 (57.14%)       44/84 (52.38%)
TGFB2 chr1 218,607,460 C T p.R211C 10/64 (15.62%) 0/2 (0%)
SEL1L2 chr20 13,856,683 C T splice donor variant 30/120 (25%) 0/0 (0%)
SPTA1 chr1 158,627,313 G C p.P920R 27/99 (27.27%) 0/0 (0%)
FAT1 chr4 187,527,274 T +GACATC nonframeshift 14/51 (27.45%) 0/0(0%)
FAT1 chr4 187,527,282 G A p.S3431F 14/51 (27.45%) 0/0(0%)