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Table 2 Five brain tumor (3 GBM) and five non-brain tumor datasets used

From: In search of druggable targets for GBM amino acid metabolism

#

Name of dataset

Number of samples

Platform - Chiptype

1

Normal Brain regions - Berchtold

172

u133p2

2

Normal Brain PFC – Harris

44

u133p2

3

Diseasea Brain - Liang

34

u133p2

4

Tumor Glioblastoma - Loeffler

70

u133p2

5

Tumor Glioblastoma - Hegi

84

(80 tumors)

u133p2

6

Normal Brain agonal stress - Li

1168

u133a

7

Disease Brain Parkinson - Moran

47

u133a

8

Tumor Glioblastoma - TCGA

540

u133a

9

Mixed Pediatric Brain (Normal-Tumor) – Donson

130

(117 tumors)

u133p2

10

Tumor Medulloblastoma – Gilbertson

76

(73 tumors)

u133p2

  1. aBrain tissues are from individuals who had been diagnosed with mild cognitive impairment. Detailed description of each dataset is available at http://r2.amc.nl