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Table 2 The top 20 most significantly downregulated probes identified by RankProd in relapsed childhood ALL (pfp < 0.01; FC < 1), 1000 permutation

From: Meta-analysis of gene expression in relapsed childhood B-acute lymphoblastic leukemia

Probe Gene FC:(class1/class2) pfp p.value
209480_at HLA-DQB1 0.8503 0 0
219737_s_at PCDH9 0.5924 0 0
210432_s_at SCN3A 0.6362 0 0
203038_at PTPRK 0.8517 0 0
206637_at P2RY14 0.7417 0 0
204897_at PTGER4 0.6231 0 0
221728_x_at XIST 0.9313 0 0
212592_at IGJ 0.7981 0 0
221841_s_at KLF4 0.6573 0 0
203910_at ARHGAP29 0.8594 0 0
206864_s_at HRK 0.6284 0 0
210448_s_at P2RX5 0.6183 0 0
214218_s_at XIST 0.9554 0 0
201005_at CD9 0.7092 0 0
210517_s_at AKAP12 0.8163 0 0
205081_at CRIP1 0.605 0 0
204439_at IFI44L 0.7068 0 0
205289_at BMP2 0.7267 0 0
  1. FC fold change, class 1 represent relapsed ALL, class 2 diagnosed ALL