Table 2 The top 20 most significantly downregulated probes identified by RankProd in relapsed childhood ALL (pfp < 0.01; FC < 1), 1000 permutation
From: Meta-analysis of gene expression in relapsed childhood B-acute lymphoblastic leukemia
Probe | Gene | FC:(class1/class2) | pfp | p.value |
|---|---|---|---|---|
209480_at | HLA-DQB1 | 0.8503 | 0 | 0 |
219737_s_at | PCDH9 | 0.5924 | 0 | 0 |
210432_s_at | SCN3A | 0.6362 | 0 | 0 |
203038_at | PTPRK | 0.8517 | 0 | 0 |
206637_at | P2RY14 | 0.7417 | 0 | 0 |
204897_at | PTGER4 | 0.6231 | 0 | 0 |
221728_x_at | XIST | 0.9313 | 0 | 0 |
212592_at | IGJ | 0.7981 | 0 | 0 |
221841_s_at | KLF4 | 0.6573 | 0 | 0 |
203910_at | ARHGAP29 | 0.8594 | 0 | 0 |
206864_s_at | HRK | 0.6284 | 0 | 0 |
210448_s_at | P2RX5 | 0.6183 | 0 | 0 |
214218_s_at | XIST | 0.9554 | 0 | 0 |
201005_at | CD9 | 0.7092 | 0 | 0 |
210517_s_at | AKAP12 | 0.8163 | 0 | 0 |
205081_at | CRIP1 | 0.605 | 0 | 0 |
204439_at | IFI44L | 0.7068 | 0 | 0 |
205289_at | BMP2 | 0.7267 | 0 | 0 |