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Table 2 List of top 5 upstream regulator genes implicated in MCF-7/Twist cells, MCF-7/Twist primary tumors, and MCF-7/Twist metastases

From: Genomic pathways modulated by Twist in breast cancer

Upstream Regulator Genes

P-value of overlap

Corrected z-score

Prediction

MCF-7/Twist cells

 Estrogen receptor

1.49E-18

−5.712

Inhibited

 NUPR1

2.34E-14

1.843

 

 TP53

7.63E-14

−0.497

 

 TNF

7.66E-14

3.849

Activated

 SMARCA4

9.56E-14

2.028

Activated

Primary tumors

 ERBB2

3.71E-06

0.231

 

 CD24

4.63E-06

1.199

 

 TP73

1.39E-05

−1.712

 

 TGFB1

2.48E-05

−0.534

 

 HSPA9

2.54E-05

−0.2

 

Metastasis

 Lh

7.23E-05

−1.027

 

 CXCL12

1.54E-04

−2.071

Inhibited

 NUP107

4.01E-04

1.052

 

 FOXA2

2.03E-03

  

 FSH

2.36E-03

−0.698

 
  1. Genes are ranked by P-value