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Table 1 List of top 5 canonical pathways that are implicated in MCF-7/Twist cell line, MCF-7/Twist primary tumors, and MCF-7/Twist metastases

From: Genomic pathways modulated by Twist in breast cancer

Canonical Pathways

P-value

Overlap (%)

Overlap (number of genes)

MCF-7/Twist cells

 Oncostatin M Signaling

3.29E-08

58.8%

20/34

 Neuregulin Signaling

7.25E-08

41.2%

35/85

 IL-8 Signaling

1.54E-07

32.2%

59/183

 NRF2-mediated Oxidative Stress Response

1.69E-07

32.6%

57/175

 GM-CSF Signaling

3.90E-07

44.3%

27/61

Primary tumors

 Role of NFAT in Cardiac Hypertrophy

2.38E-06

40.8%

71/174

 Signaling by Rho Family GTPases

4.87E-06

38.1%

88/231

 IGF-1 Signaling

5.96E-06

45.8%

44/96

 α-Adrenergic Signaling

7.05E-06

47.1%

40/85

 Dopamine-DARPP32 Feedback in cAMP Signaling

7.61E-06

40.8%

64/157

Metastases

 Role of Tissue Factor in Cancer

5.36E-07

34.6%

37/107

 Molecular Mechanisms of Cancer

6.94E-06

24.0%

86/358

 Role of NFAT in Cardiac Hypertrophy

8.39E-06

28.2%

49/174

 CXCR4 Signaling

9.26E-06

29.1%

44/151

 Pancreatic Adenocarcinoma Signaling

1.01E-05

32.1%

34/106

  1. Pathways are ranked by P-value