Skip to main content

Advertisement

Table 3 The 25 most differentially expressed genes in the MNTI relative to the hNCC dataset

From: A germline mutation of CDKN2A and a novel RPLP1-C19MC fusion detected in a rare melanotic neuroectodermal tumor of infancy: a case report

Gene Description Chromosome Expression (FPKM)
    MNTI hNCC
RPS17 Ribosomal protein S17 15 1616.3 0.0
TTR Transthyretin 18 532.5 2.6
THBS2 Thrombospondin 2 6 298.3 0.5
TNNT3 Troponin T type 3 (skeletal, fast) 11 266.4 0.0
BPIFB4 BPI fold containing family B, member 4 20 262.5 0.0
TMEM176A Transmembrane protein 176A 7 172.9 0.0
SPON2 Spondin 2, extracellular matrix protein 4 169.2 2.0
HLA-DRA Major histocompatibility complex, class II, DR alpha 6 162.7 0.0
TYR Tyrosinase 11 144.2 0.0
MYL1 Myosin, light chain 1, alkali; skeletal, fast 2 141.2 0.0
FDCSP Follicular dendritic cell secreted protein 4 117.7 0.0
MYL2 Myosin, light chain 2, regulatory, cardiac, slow 12 117.4 0.0
LRRC15 Leucine rich repeat containing 15 3 105.6 0.0
IL32 Interleukin 32 16 105.6 0.0
DPT Dermatopontin 1 99.9 0.0
LYPD2 LY6/PLAUR domain containing 2 8 73.3 0.0
TNNI2 Troponin I type 2 (skeletal, fast) 11 71.2 0.0
MEG3 Maternally expressed 3 (non-protein coding) 14 57.9 0.6
MIR770 microRNA 770 14 57.9 0.6
MT1E Metallothionein 1E 16 46.2 0.0
TYROBP TYRO protein tyrosine kinase binding protein 19 43.2 0.0
SLC1A7 Solute carrier family 1 (glutamate transporter), member 7 1 42.5 0.0
POU3F3 POU class 3 homeobox 3 2 0.0 54.3
MTRNR2L10 MT-RNR2-like 10 X 0.0 89.6
MIR4737 microRNA 4737 17 0.0 1873.8
  1. FPKM fragments per kilobase per million mapped reads, hNCC human neural crest cells