TY - JOUR AU - McErlean, A. AU - Ginsberg, M. S. PY - 2011 DA - 2011// TI - Epidemiology of lung cancer JO - Semin Roentgenol VL - 46 UR - https://doi.org/10.1053/j.ro.2011.02.002 DO - 10.1053/j.ro.2011.02.002 ID - McErlean2011 ER - TY - JOUR AU - Reck, M. AU - Heigener, D. F. AU - Mok, T. AU - Soria, J. C. AU - Rabe, K. F. PY - 2013 DA - 2013// TI - Management of non-small-cell lung cancer: recent developments JO - Lancet VL - 382 UR - https://doi.org/10.1016/S0140-6736(13)61502-0 DO - 10.1016/S0140-6736(13)61502-0 ID - Reck2013 ER - TY - JOUR AU - Haghgoo, S. M. AU - Allameh, A. AU - Mortaz, E. AU - Garssen, J. AU - Folkerts, G. AU - Barnes, P. J. PY - 2015 DA - 2015// TI - Pharmacogenomics and targeted therapy of Cancer: focusing on non-small cell lung Cancer JO - Eur J Pharmacol VL - 754 UR - https://doi.org/10.1016/j.ejphar.2015.02.029 DO - 10.1016/j.ejphar.2015.02.029 ID - Haghgoo2015 ER - TY - JOUR AU - Yang, L. AU - Froberg, J. E. AU - Lee, J. T. PY - 2014 DA - 2014// TI - Long noncoding RNAs: fresh perspectives into the RNA world JO - Trends Biochem Sci VL - 39 UR - https://doi.org/10.1016/j.tibs.2013.10.002 DO - 10.1016/j.tibs.2013.10.002 ID - Yang2014 ER - TY - JOUR AU - Guttman, M. AU - Donaghey, J. AU - Carey, B. W. AU - Garber, M. AU - Grenier, J. K. AU - Munson, G. PY - 2011 DA - 2011// TI - lincRNAs act in the circuitry controlling pluripotency and differentiation JO - Nature VL - 477 UR - https://doi.org/10.1038/nature10398 DO - 10.1038/nature10398 ID - Guttman2011 ER - TY - JOUR AU - Sheik Mohamed, J. AU - Gaughwin, P. M. AU - Lim, B. AU - Robson, P. AU - Lipovich, L. PY - 2010 DA - 2010// TI - Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells JO - RNA VL - 16 UR - https://doi.org/10.1261/rna.1441510 DO - 10.1261/rna.1441510 ID - Sheik Mohamed2010 ER - TY - JOUR AU - Tsai, M. C. AU - Spitale, R. C. AU - Chang, H. Y. PY - 2011 DA - 2011// TI - Long intergenic noncoding RNAs: new links in cancer progression JO - Cancer Res VL - 71 UR - https://doi.org/10.1158/0008-5472.CAN-10-2483 DO - 10.1158/0008-5472.CAN-10-2483 ID - Tsai2011 ER - TY - JOUR AU - Wapinski, O. AU - Chang, H. Y. PY - 2011 DA - 2011// TI - Long noncoding RNAs and human disease JO - Trends Cell Biol VL - 21 UR - https://doi.org/10.1016/j.tcb.2011.04.001 DO - 10.1016/j.tcb.2011.04.001 ID - Wapinski2011 ER - TY - JOUR AU - Bhan, A. AU - Mandal, S. S. PY - 2014 DA - 2014// TI - Long noncoding RNAs: emerging stars in gene regulation, epigenetics and human disease JO - Chem Med Chem VL - 9 UR - https://doi.org/10.1002/cmdc.201300534 DO - 10.1002/cmdc.201300534 ID - Bhan2014 ER - TY - JOUR AU - Li, C. H. AU - Chen, Y. PY - 2013 DA - 2013// TI - Targeting long non-coding RNAs in cancers: progress and prospects JO - Int J Biochem Cell Biol VL - 45 UR - https://doi.org/10.1016/j.biocel.2013.05.030 DO - 10.1016/j.biocel.2013.05.030 ID - Li2013 ER - TY - JOUR AU - Young, T. L. AU - Matsuda, T. AU - Cepko, C. L. PY - 2005 DA - 2005// TI - The noncoding RNA taurine upregulated gene 1 is required for differentiation of the murine retina JO - Curr Biol VL - 15 UR - https://doi.org/10.1016/j.cub.2005.02.027 DO - 10.1016/j.cub.2005.02.027 ID - Young2005 ER - TY - JOUR AU - Han, Y. AU - Liu, Y. AU - Gui, Y. AU - Cai, Z. PY - 2013 DA - 2013// TI - Long intergenic non-coding RNA TUG1 is overexpressed in urothelial carcinoma of the bladder JO - J Surgical Oncol VL - 107 UR - https://doi.org/10.1002/jso.23264 DO - 10.1002/jso.23264 ID - Han2013 ER - TY - JOUR AU - Zhang, Q. AU - Geng, P. L. AU - Yin, P. AU - Wang, X. L. AU - Jia, J. P. AU - Yao, J. PY - 2013 DA - 2013// TI - Down-regulation of long non-coding RNA TUG1 inhibits osteosarcoma cell proliferation and promotes apoptosis JO - Asian Pac J Cancer Prev VL - 14 UR - https://doi.org/10.7314/APJCP.2013.14.4.2311 DO - 10.7314/APJCP.2013.14.4.2311 ID - Zhang2013 ER - TY - JOUR AU - Xu, Y. AU - Wang, J. AU - Qiu, M. AU - Xu, L. AU - Li, M. AU - Jiang, F. PY - 2015 DA - 2015// TI - Upregulation of the long noncoding RNA TUG1 promotes proliferation and migration of esophageal squamous cell carcinoma JO - Tumour Biol VL - 36 UR - https://doi.org/10.1007/s13277-014-2763-6 DO - 10.1007/s13277-014-2763-6 ID - Xu2015 ER - TY - JOUR AU - Zhang, E. B. AU - Yin, D. D. AU - Sun, M. AU - Kong, R. AU - Liu, X. H. AU - You, L. H. PY - 2014 DA - 2014// TI - P53-regulated long non-coding RNA TUG1 affects cell proliferation in human non-small cell lung cancer, partly through epigenetically regulating HOXB7 expression JO - Cell Death Dis VL - 5 UR - https://doi.org/10.1038/cddis.2014.201 DO - 10.1038/cddis.2014.201 ID - Zhang2014 ER - TY - JOUR AU - Yang, L. AU - Lin, C. AU - Liu, W. AU - Zhang, J. AU - Ohgi, K. A. AU - Grinstein, J. D. PY - 2011 DA - 2011// TI - ncRNA- and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs JO - Cell VL - 147 UR - https://doi.org/10.1016/j.cell.2011.08.054 DO - 10.1016/j.cell.2011.08.054 ID - Yang2011 ER - TY - JOUR AU - Ponting, C. P. AU - Oliver, P. L. AU - Reik, W. PY - 2009 DA - 2009// TI - Evolution and functions of long noncoding RNAs JO - Cell VL - 136 UR - https://doi.org/10.1016/j.cell.2009.02.006 DO - 10.1016/j.cell.2009.02.006 ID - Ponting2009 ER - TY - JOUR AU - Stadhouders, R. AU - Kolovos, P. AU - Brouwer, R. AU - Zuin, J. AU - Heuvel, A. AU - Kockx, C. PY - 2013 DA - 2013// TI - Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions JO - Nat Protoc VL - 8 UR - https://doi.org/10.1038/nprot.2013.018 DO - 10.1038/nprot.2013.018 ID - Stadhouders2013 ER - TY - JOUR AU - Zhao, Z. AU - Tavoosidana, G. AU - Sjolinder, M. AU - Gondor, A. AU - Mariano, P. AU - Wang, S. PY - 2006 DA - 2006// TI - Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions JO - Nature Gen VL - 38 UR - https://doi.org/10.1038/ng1891 DO - 10.1038/ng1891 ID - Zhao2006 ER - TY - JOUR AU - Altschul, S. F. AU - Gish, W. AU - Miller, W. AU - Myers, E. W. AU - Lipman, D. J. PY - 1990 DA - 1990// TI - Basic local alignment search tool JO - J Mol Biol VL - 215 UR - https://doi.org/10.1016/S0022-2836(05)80360-2 DO - 10.1016/S0022-2836(05)80360-2 ID - Altschul1990 ER - TY - JOUR AU - Langmead, B. AU - Trapnell, C. AU - Pop, M. AU - Salzberg, S. L. PY - 2009 DA - 2009// TI - Ultrafast and memory-efficient alignment of short DNA sequences to the human genome JO - Genome Biol VL - 10 UR - https://doi.org/10.1186/gb-2009-10-3-r25 DO - 10.1186/gb-2009-10-3-r25 ID - Langmead2009 ER - TY - JOUR AU - Williams, R. L. AU - Starmer, J. AU - Mugford, J. W. AU - Calabrese, J. M. AU - Mieczkowski, P. AU - Yee, D. PY - 2014 DA - 2014// TI - fourSig: a method for determining chromosomal interactions in 4C-Seq data JO - Nucleic Acids Res VL - 42 UR - https://doi.org/10.1093/nar/gku156 DO - 10.1093/nar/gku156 ID - Williams2014 ER - TY - JOUR AU - Orom, U. A. AU - Derrien, T. AU - Beringer, M. AU - Gumireddy, K. AU - Gardini, A. AU - Bussotti, G. PY - 2010 DA - 2010// TI - Long noncoding RNAs with enhancer-like function in human cells JO - Cell VL - 143 UR - https://doi.org/10.1016/j.cell.2010.09.001 DO - 10.1016/j.cell.2010.09.001 ID - Orom2010 ER - TY - JOUR AU - Wang, K. C. AU - Yang, Y. W. AU - Liu, B. AU - Sanyal, A. AU - Corces-Zimmerman, R. AU - Chen, Y. PY - 2011 DA - 2011// TI - A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression JO - Nature VL - 472 UR - https://doi.org/10.1038/nature09819 DO - 10.1038/nature09819 ID - Wang2011 ER - TY - JOUR AU - Mattick, J. S. AU - Amaral, P. P. AU - Dinger, M. E. AU - Mercer, T. R. AU - Mehler, M. F. PY - 2009 DA - 2009// TI - RNA regulation of epigenetic processes JO - Bioessays VL - 31 UR - https://doi.org/10.1002/bies.080099 DO - 10.1002/bies.080099 ID - Mattick2009 ER - TY - JOUR AU - Khalil, A. M. AU - Guttman, M. AU - Huarte, M. AU - Garber, M. AU - Raj, A. AU - Rivea Morales, D. PY - 2009 DA - 2009// TI - Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression JO - Proc Natl Acad Sci U S A VL - 106 UR - https://doi.org/10.1073/pnas.0904715106 DO - 10.1073/pnas.0904715106 ID - Khalil2009 ER - TY - JOUR AU - Dekker, J. AU - Rippe, K. AU - Dekker, M. AU - Kleckner, N. PY - 2002 DA - 2002// TI - Capturing chromosome conformation JO - Science VL - 295 UR - https://doi.org/10.1126/science.1067799 DO - 10.1126/science.1067799 ID - Dekker2002 ER - TY - JOUR AU - Splinter, E. AU - Grosveld, F. AU - Laat, W. PY - 2004 DA - 2004// TI - 3C technology: analyzing the spatial organization of genomic loci in vivo JO - Methods Enzymol VL - 375 UR - https://doi.org/10.1016/S0076-6879(03)75030-7 DO - 10.1016/S0076-6879(03)75030-7 ID - Splinter2004 ER - TY - JOUR AU - Gondor, A. AU - Rougier, C. AU - Ohlsson, R. PY - 2008 DA - 2008// TI - High-resolution circular chromosome conformation capture assay JO - Nat Protoc VL - 3 UR - https://doi.org/10.1038/nprot.2007.540 DO - 10.1038/nprot.2007.540 ID - Gondor2008 ER - TY - JOUR AU - Jin, F. AU - Li, Y. AU - Dixon, J. R. AU - Selvaraj, S. AU - Ye, Z. AU - Lee, A. Y. PY - 2013 DA - 2013// TI - A high-resolution map of the three-dimensional chromatin interactome in human cells JO - Nature VL - 503 ID - Jin2013 ER - TY - JOUR AU - Kaufmann, S. AU - Fuchs, C. AU - Gonik, M. AU - Khrameeva, E. E. AU - Mironov, A. A. AU - Frishman, D. PY - 2015 DA - 2015// TI - Inter-chromosomal contact networks provide insights into Mammalian chromatin organization JO - PLoS One VL - 10 UR - https://doi.org/10.1371/journal.pone.0126125 DO - 10.1371/journal.pone.0126125 ID - Kaufmann2015 ER - TY - JOUR AU - Dasgupta, T. AU - Ladd, A. N. PY - 2012 DA - 2012// TI - The importance of CELF control: molecular and biological roles of the CUG-BP, Elav-like family of RNA-binding proteins JO - Wiley Interdiscip Rev RNA VL - 3 UR - https://doi.org/10.1002/wrna.107 DO - 10.1002/wrna.107 ID - Dasgupta2012 ER - TY - JOUR AU - Timchenko, N. A. AU - Welm, A. L. AU - Lu, X. AU - Timchenko, L. T. PY - 1999 DA - 1999// TI - CUG repeat binding protein (CUGBP1) interacts with the 5’ region of C/EBPbeta mRNA and regulates translation of C/EBPbeta isoforms JO - Nucleic Acids Res VL - 27 UR - https://doi.org/10.1093/nar/27.22.4517 DO - 10.1093/nar/27.22.4517 ID - Timchenko1999 ER - TY - JOUR AU - Guerzoni, C. AU - Bardini, M. AU - Mariani, S. A. AU - Ferrari-Amorotti, G. AU - Neviani, P. AU - Panno, M. L. PY - 2006 DA - 2006// TI - Inducible activation of CEBPB, a gene negatively regulated by BCR/ABL, inhibits proliferation and promotes differentiation of BCR/ABL-expressing cells JO - Blood VL - 107 UR - https://doi.org/10.1182/blood-2005-08-3181 DO - 10.1182/blood-2005-08-3181 ID - Guerzoni2006 ER - TY - JOUR AU - Talwar, S. AU - Balasubramanian, S. AU - Sundaramurthy, S. AU - Wilusz, C. J. AU - Kuppuswamy, D. PY - 2013 DA - 2013// TI - Overexpression of RNA-binding protein CELF1 prevents apoptosis and destabilizes pro-apoptotic mRNAs in oral cancer cells JO - RNA Biol VL - 10 UR - https://doi.org/10.4161/rna.23315 DO - 10.4161/rna.23315 ID - Talwar2013 ER - TY - JOUR AU - Wu, L. N. AU - Xue, Y. J. AU - Zhang, L. J. AU - Ma, X. M. AU - Chen, J. F. PY - 2013 DA - 2013// TI - Si-RNA mediated knockdown of CELF1 gene suppressed the proliferation of human lung cancer cells JO - Cancer Cell Int VL - 13 UR - https://doi.org/10.1186/1475-2867-13-115 DO - 10.1186/1475-2867-13-115 ID - Wu2013 ER - TY - JOUR AU - Blech-Hermoni, Y. AU - Stillwagon, S. J. AU - Ladd, A. N. PY - 2013 DA - 2013// TI - Diversity and conservation of CELF1 and CELF2 RNA and protein expression patterns during embryonic development JO - Dev Dyn VL - 242 UR - https://doi.org/10.1002/dvdy.23959 DO - 10.1002/dvdy.23959 ID - Blech-Hermoni2013 ER -