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Table 2 Relative quantification of mRNA expression (fold change) in tumour sample subsets stratified by histology, stage, sex and smoking history

From: The MYCN-HMGA2-CDKN2A pathway in non-small cell lung carcinoma—differences in histological subtypes

Genes

All

Histology

Stage

Sex

Smoking history

  

AC

SCC

Other

p-value

I

II

III

p-value

Male

Female

p-value

Never

Former

Current

p-value

MYCN

n = 170

n = 94

n = 44

n = 32

 

n = 94

n = 54

n = 22

 

n = 91

n = 79

 

n = 11

n = 54

n = 105

 

median

0.43

0.46

0.54

0.24

0.517

0.46

0.38

0.40

0.723

0.47

0.37

0.057

1.12

0.47

0.37

0.195

(range)

(0.01–943.85)

(0.03–943.85)

(0.02–10.25)

(0.01–43.00)

 

(0.02–88.53)

(0.01–166.37)

(0.32–943.85)

 

(0.01–943.85)

(0.03–166.37)

 

(0.20–13.55)

(0.01–88.53)

(0.03–943.85)

 

HMGA2

n = 132

n = 71

n = 36

n = 25

 

n = 70

n = 41

n = 21

 

n = 79

n = 53

 

n = 8

n = 44

n = 80

 

median

20.01

13.12

70.65

5.77

0.003**

15.33

40.88

7.58

0.360

17.33

23.16

0.758

18.28

29.14

16.98

0.945

(range)

(0.21–33877.07)

(0.56–2736.65)

(0.71–33877.07)

(0.21–10749.96)

 

(0.21–13499.32)

(0.27–33877.07)

(0.31–2168.39)

 

(0.27–33877.07)

(0.21–13499.32)

 

(2.67–640.82)

(0.21–13499.33)

(0.31–33877.07)

 

CDKN2A

n = 171

n = 96

n = 44

n = 31

 

n = 95

n = 53

n = 23

 

n = 93

n = 78

 

n = 10

n = 55

n = 106

 

median

4.94

4.93

4.85

6.55

0.777

4.93

5.18

5.48

0.811

3.77

8.40

0.013*,**

5.25

4.48

5.31

0.505

(range)

(0.07–7818.30)

(0.08–7818.30)

(0.21–333.40)

(0.07–193.94)

 

(0.07–7818.30)

(0.08–193.94)

(0.19–156.38)

 

(0.07–193.94)

(0.43–7818.30)

 

(2.17–179.05)

(0.07–7818.30)

(0.08–333.40)

 

DICER1

n = 164

n = 93

n = 40

n = 31

 

n = 87

n = 54

n = 23

 

n = 89

n = 75

 

n = 11

n = 51

n = 102

 

median

0.99

0.91

1.00

1.25

0.304

1.03

0.90

0.88

0.550

1.01

0.87

0.763

1.68

0.95

0.89

0.698

(range)

(0.21–119.51)

(0.24–119.51)

(0.21–7.76)

(0.25–5.07)

 

(0.21–45.80)

(0.25–119.51)

(0.27–5.70)

 

(0.21–7.76)

(0.24–119.51)

 

(0.27–2.23)

(0.21–45.80)

(0.25–119.51)

 
  1. AC adenocarcinoma, SCC squamous cell carcinoma, *p-value < 0.05 Mann–Whitney U test. **p-value < 0.05 Kruskal-Wallis test