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Table 3 Distribution of genotype and allele frequencies in with NK/T lymphoma patients and controls

From: LTA + 252A > G polymorphism is associated with risk of nasal NK/T-cell lymphoma in a Chinese population: a case-control study

Genotypes

Controls, n (%)

Cases, n (%)

OR (95 % CI)

P value

IL-10 -3575

    

  TT

278(93)

117(94)

1

 

  TA

22(7)

8(6)

0.86(0.37-1.99)

0.73

  AA

0

0

  

  T

578(96)

242(97)

1

 

  A

22(4)

8(3)

0.87(0.38-1.98)

0.73

IL-10 -1082

    

  AA

237(79)

101(81)

1

 

  AG

60(20)

24(19)

0.94(0.55-1.59)

0.81

  GG

3(1)

0(0)

  

  A

534(89)

226(90)

1

 

  G

66(11)

24(10)

0.86(0.52-1.41)

0.55

IL-10 -819

    

  CC

39(13)

9(7)

1

 

  CT

125(42)

59(47)

2.00(0.93-4.49)

0.08

  TT

136(45)

57(46)

1.81(0.83-3.99)

0.14

  C

203(34)

76(30)

  

  T

397(66)

174(70)

1.17(0.85-1.61)

0.33

IL-10 -592

    

  CC

38(13)

9(7)

1

 

  AC

124(41)

59(47)

2.00(0.91-4.43)

0.08

  AA

138(46)

57(46)

1.74 (0.79-3.84)

0.17

  C

200(33)

77(31)

1

 

  A

400(67)

173(69)

1.12(0.82-1.54)

0.47

TNF-α -857

    

  CC

239(79)

96(78)

1

 

  CT

56(19)

28(22)

1.25(0.75-2.08)

0.40

  TT

5(1)

1(0)

0.50(0.06-4.32)

0.53

  C

534(89)

220(88)

1

 

  T

66(11)

30(12)

1.10(0.69-1.75)

0.68

TNF-α -308

    

  GG

260(87)

115(92)

1

 

  AG

40(13)

10(8)

0.56 (0.27-1.17)

0.12

  AA

0

0

  

  G

560(93)

240(96)

1

 

  A

40(7)

10(4)

0.58 (0.29-1.19)

0.14

TNF-α -238

    

  GG

267(89)

116(93)

1

 

  AG

32(11)

9(7)

0.65(0.30-1.40)

0.27

  AA

1(0)

0(0)

-

 

  G

566(94)

241(96)

1

 

  A

34(6)

9(4)

0.62(0.29-1.32)

0.21

LTA +252

    

  GG

56(19)

9(7)

1

 

  GA

149(50)

71(57)

2.95(1.34-6.48)

0.01*

  AA

95(31)

45(36)

2.97(1.39-6.33)

0.01*

  GA + AA

244(81)

116(93)

2.96(1.42-6.19)

0.004*

  G

261(44)

89(36)

1

 

  A

339(56)

161(64)

1.39(1.03-1.89)

0.03*

CTLA-4 -1661

    

  AA

216(72)

84(67)

1

 

  AG

78(26)

40(32)

1.32(0.84-2.08)

0.24

  GG

6(2)

1(0)

0.43(0.05-3.61)

0.44

  G

90(15)

42(17)

1

 

  A

510(85)

208(83)

0.87(0.59-1.30)

0.51

CTLA-4 -318

    

  CC

222(74)

88(70)

1

 

  CT

73(24)

36(29)

1.24(0.78-1.99)

0.36

  TT

5(2)

1(0)

0.51(0.05-4.38)

0.54

  C

517(86)

212(85)

1

 

  T

83(14)

38(15)

1.11(0.74-1.69)

0.60

CTLA-4 + 49

    

  AA

34(11)

8(6)

1

 

  GA

118(39)

60(48)

2.16(0.94-4.96)

0.07

  GG

148(49)

57(46)

1.64(0.72-3.75)

0.24

  A

186(31)

76(30)

1

 

  G

414(69)

174(70)

0.97(0.71-1.34)

0.86

CTLA-4 CT60

    

  AA

10(3)

3(2)

1

 

  GA

82(27)

32(26)

1.30(0.34-5.04)

0.70

  GG

208(69)

90(72)

1.44(0.39-5.36)

0.58

  A

102(17)

38(15)

1

 

  G

498(83)

212(85)

1.14(0.76-1.71)

0.52

  1. *adjusted for age, sex