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Table 6 Comparison of ontological categories differentially expressed in Cetuximab-sensitive vs . resistant cell lines

From: Transcriptional changes associated with resistance to inhibitors of epidermal growth factor receptor revealed using metaanalysis

 

Cetuximab: Overexpressed in sensitive cells

  

Overexpressed in resistant cells

 
 

Term

p_value

 

Term

p_value

Table 6a

IM

response to wounding

1.3E-10

DF

ectoderm development

9.2E-10

CC

regulation of cell proliferation

1.6E-09

DF

epidermis development

1.4E-09

CC

positive regulation of cell proliferation

3.5E-07

DF

epithelium development

1.0E-08

M

chemotaxis

8.9E-07

DF

epithelial cell differentiation

1.5E-07

M

taxis

8.9E-07

DF

keratinocyte differentiation

6.2E-05

M

cell migration

1.7E-06

DF

cornified envelope

6.5E-05

M

localization of cell

2.6E-06

EC

extracellular matrix

7.8E-05

M

cell motility

2.6E-06

DF

epidermal cell differentiation

1.2E-04

M

Cell communication

3.5E-06

DF

peptide cross-linking

1.7E-04

R

regulation of response to external stimulus

4.0E-06

IM

wound healing

1.7E-04

Table 6b

IM

inflammatory response

6.5E-06

CC

regulation of cell proliferation

4.3E-04

IM

wound healing

9.1E-06

CY

Cell structure and motility

3.3E-04

IM

immune response

9.8E-06

CY

12q12-q13

6.9E-04

IM

Immunity and defense

6.7E-05

T

transcription repressor activity

8.4E-04

IM

regulation of inflammatory response

3.5E-04

   

S

Signal transduction

1.5E-05

   

S

Jak-STAT signaling pathway

5.1E-04

   

S

JAK-STAT cascade

6.7E-04

   

V

regulation of vascular endothelial growth factor production

3.2E-05

   

V

Angiogenesis

3.8E-05

   

V

blood coagulation

5.8E-04

   
  1. a) Top ten categories with best p-values. b) Selected categories with p-value better than 10-4 (see Additional file 7).