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Table 3 Gene expression analysis of MAP3K1, FGFR2, TNRC9 and LSP1 in 40 human breast cancer cell lines by quantitative RT-PCR, represented by normalized Ct values

From: Low-risk susceptibility alleles in 40 human breast cancer cell lines

Breast cancer cell lines Transcript expression (normalized Ct values)
  MAP3K1 FGFR2 TNRC9 LSP1
BT20 23 30 45 38
BT474 24 35 22 35
BT483 22 31 25 36
BT549 29 32 39 40
CAMA-1 24 33 26 45
EVSA-T 25 33 25 45
HCC1937 26 32 37 45
Hs578T 26 45 45 34
MCF-7 25 34 28 39
MDA-MB-134VI 22 37 24 35
MDA-MB-157 25 44 33 29
MDA-MB-175VII 24 35 23 36
MDA-MB-231 26 45 45 35
MDA-MB-330 26 32 27 33
MDA-MB-361 23 34 23 44
MDA-MB-415 23 28 20 33
MDA-MB-435s 25 45 45 45
MDA-MB-436 26 35 31 37
MDA-MB-453 24 36 29 45
MDA-MB-468 25 35 37 37
MPE600 23 31 22 42
OCUB-F 23 39 23 42
SK-BR-3 25 32 26 37
SK-BR-5 23 37 21 43
SK-BR-7 26 39 45 35
SUM102PT 25 35 32 29
SUM1315M02 26 43 44 35
SUM149PT 27 38 45 37
SUM159PT 27 45 43 34
SUM185PE 23 38 23 45
SUM190PT 24 45 23 45
SUM225CWN 24 36 23 39
SUM229PE 25 39 33 36
SUM44PE 22 41 26 36
SUM52PE 24 24 24 37
T47D 20 36 45 35
UACC812 24 38 24 45
UACC893 21 36 25 36
ZR75-1 24 36 24 32
ZR75-30 23 33 23 43
Total high expressers (Ct <20) 1 0 1 0
Total moderate expressers (Ct 20–30) 39 2 23 2
Total low expressers (Ct >30–35) 0 12 4 5
Total no expressers (Ct >35) 0 26 12 33