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Table 1 Seven SNPs in the FGFR2 and FGFR4 genes

From: Genetic variants in FGFR2 and FGFR4 genes and skin cancer risk in the Nurses' Health Study

SNP

rs#

Chromosome

Location

MAF-controls (%)a

MAF-CEU (%)b

FGFR2 intron 2

rs11200014

10

123324920

42

47

FGFR2 intron 2

rs2981579

10

123327325

42

47

FGFR2 intron 2

rs1219648

10

123336180

40

47

FGFR2 intron 2

rs2420946

10

123341314

40

47

FGFR4 Val10Ile

rs1966265*

5

176449237

-

20

 

rs12519145*

5

176488129

22

19

FGFR4 Leu136Pro

rs376618

5

176450403

24

26

FGFR4 Gly388Arg

rs351855

5

176452849

31

28

  1. *The SNP rs1966265 failed the assay and the rs12519145 was genotyped instead (r2 = 0.8).
  2. a Minor allele frequency (MAF) was calculated among controls in this study.
  3. b MAF was based on the HapMap CEU (Utah residents with ancestry from northern and western Europe) samples.
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BMC Cancer

ISSN: 1471-2407

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