Skip to main content

Table 2 Analysis of association between combinations of genotypes and risk for colorectal cancer, in the entire study population.

From: Low-penetrance alleles predisposing to sporadic colorectal cancers: a French case-controlled genetic association study

A. Encoding of theoretical combinations of genotypes

Patterns of genotypic combinations

Effect on colorectal cancer

PTGS1 c.639C>A

PLA2G2A c.435+230C>T

PPARG c.1431C>T

IL8 c.-352T>A

MTHFR c.1286A>C

 

0

0

0

0

0

Null or very weak (reference pattern)

0

1 or 2

1 or 2

0

0

Protective (protective patterns) *

1 or 2

0

0

1 or 2

1 or 2

Predisposing (predisposing patterns)

Other genotypes

Average (mixed patterns)

B. Analysis of observed combination of genotypes association with colorectal cancer (n = 2144, adjusted by sex and age)

Patterns of genotypic combinations

Controls

Patients

OR (95% CI)

P-value**

 

Reference pattern

95 (8.5%)

63 (6.2%)

1.00

  

Protective patterns

7 (0.6%)

4 (0.4%)

0.86 (0.24–3.06)

0.8180

 

Mixed patterns

978 (87.2%)

890 (87.0%)

1.37 (0.98–1.90)

0.0602

 

Predisposing patterns

41 (3.7%)

66 (6.4%)

2.65 (1.58–4.42)

0.0005

 

Reference and mixed patterns

1080 (96.3%)

957 (93.5%)

1.00

  

Predisposing patterns

41 (3.7%)

66 (6.5%)

1.97 (1.31–2.97)

0.0009

 
  1. * These patterns were inferred from the identification of the predisposing patterns.
  2. ** Observed associations in bold met a false discovery rate criterion of < 0.1.