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Table 2 HER2-neu primers

From: Genomic activation of the EGFR and HER2-neu genes in a significant proportion of invasive epithelial ovarian cancers

 

First step(5'—3')

Second step(5'—3')

Product Size(BP)

Exon18

F: ccagcactgacccaccac

F: ccagcactgacccaccac

228

 

R: ctcttgcccctcccatca

R: *agaactgccgaccacacc

 

Exon19

F: cccacgctcttctcactcat

F: cccacgctcttctcactcat

183

 

R: agagaccagagcccagacct

R: *gggtccttcctgtcctccta

 

Exon20

F: tgtggtctcccataccctct

F: *ctctcagcgtacccttgtcc

230

 

R: caaagagcccaggtgcatac

R: caaagagcccaggtgcatac

 

Exon21

F: tacatgggtgcttcccattc

F: tacatgggtgcttcccattc

201

 

R:catgggctagacaccactcc

R: *gctccttggtccttcaccta

 

Exon22

F: tagcccatgggagaactctg

F: *ctccccacaacacacagttg

186

 

R: agctctcatcctccctccag

R: agctctcatcctccctccag

 

Exon23

F: actcctgaccctgtctctgc

F: actcctgaccctgtctctgc

220

 

R: ctttcatgccccttgtgg

R: *aggacctcccaccctcct

 

Exon24

F: accagactggagggggagt

F: *agaggcagcaagcacacag

203

 

R: gagggtgctcttagccacag

R: gagggtgctcttagccacag

 
  1. HER2-neu primers used for amplification (hemi-nested PCRs)
  2. * indicates that a GC clamp was added at the 5' end of the primer,
  3. GC clamp: cgcccgccgcgccccgcgcccggcccgccgcccccgcccg