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Table 1 Global analysis of the clones generated by Suppression Subtractive Hybridization

From: Suppression subtractive hybridization profiles of radial growth phase and metastatic melanoma cell lines reveal novel potential targets

SSH collections

RGP library

Met library

Number of clones obtained

2016

1920

Sequences analyzed

367 (18.5%)

386 (20.5%)

Sequences matching human mRNAs/ESTs

351 (94.1%)

368 (95%)

Sequences matching introns

5 (1.3%)

1 (0.26%)

Chimerical clones

2 (0.5%)

2 (0.5%)

Sequences matching intergenic regions

4 (1.1%)

4 (1.0%)

Sequences matching mitochondrial genome

5 (1.3%)

11 (2.8%)

Number of genes represented

288 (82%)

217 (59%)

Genes represented by more than one clone

37 (11%)

32 (8.7%)

Sequences corresponding to genes common in both libraries

12 (2.2%)

10 (2.5%)