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Table 1 Global analysis of the clones generated by Suppression Subtractive Hybridization

From: Suppression subtractive hybridization profiles of radial growth phase and metastatic melanoma cell lines reveal novel potential targets

SSH collections RGP library Met library
Number of clones obtained 2016 1920
Sequences analyzed 367 (18.5%) 386 (20.5%)
Sequences matching human mRNAs/ESTs 351 (94.1%) 368 (95%)
Sequences matching introns 5 (1.3%) 1 (0.26%)
Chimerical clones 2 (0.5%) 2 (0.5%)
Sequences matching intergenic regions 4 (1.1%) 4 (1.0%)
Sequences matching mitochondrial genome 5 (1.3%) 11 (2.8%)
Number of genes represented 288 (82%) 217 (59%)
Genes represented by more than one clone 37 (11%) 32 (8.7%)
Sequences corresponding to genes common in both libraries 12 (2.2%) 10 (2.5%)