Table 3 Transcripts with median values with at least 3 fold difference between metastatic and primary tumor samples
Gene Symbol | Probe_ID | P1 | P2 | P3 | P4 |
|---|---|---|---|---|---|
Upregulated Transcripts | Â | Â | Â | Â | |
HBB | 32052_at | 22.37 | 5.78 | 13.25 | 56.28 |
SPP1 | 34342_s_at | 24.16 | 26.78 | 4.75 | 5.39 |
HBA1///HBA2 | 31525_s_at | 15.14 | 4.47 | 13.65 | 108.11 |
LGR4 | 43585_at | 7.39 | 7.43 | 20.89 | 24.82 |
AR | 1577_at | 14.35 | 12.97 | 12.24 | 14.78 |
PRO1073 | 49666_s_at | 4.56 | 13.25 | 10.01 | 13.5 |
UTRN | 42646_at | 10.11 | 6.02 | 12.11 | 16.31 |
HNT | 59070_at | 5.37 | 9.69 | 12.08 | 13.67 |
SDCCAG3 | 43014_at | 7.99 | 8.57 | 11.24 | 17.32 |
LOC64744 | 42739_at | 7.3 | 9.64 | 9.57 | 14.51 |
--- | 1089_i_at | 5.06 | 4.14 | 12.12 | 22.01 |
SPP1 | 2092_s_at | 14.05 | 12.94 | 3.35 | 4.07 |
UBE2H | 58777_at | 9.5 | 7.45 | 6.55 | 15.13 |
SRPK1 | 63687_at | 6.06 | 4.36 | 10.61 | 12.82 |
NCK2 | 33003_at | 5 | 9.14 | 8.5 | 7.34 |
HIST1H3H | 36757_at | 7.26 | 17.07 | 8.47 | 5.61 |
PPP4R2 | 48663_at | 5.09 | 6.97 | 8.59 | 16.16 |
C8orf16 | 47339_at | 6.54 | 8.15 | 9.53 | 7.39 |
--- | 55943_at | 3.41 | 7.47 | 15.31 | 8.01 |
--- | 64642_s_at | 8.25 | 6.42 | 7.04 | 10.6 |
EP400 | 47518_at | 5.94 | 9.27 | 4.51 | 9.32 |
GOLT1A | 45144_at | 3.9 | 6.17 | 8.37 | 12.32 |
--- | 52853_g_at | 9.83 | 7.1 | 6.25 | 7.03 |
LOC284058 | 44791_at | 8.25 | 10.17 | 4.55 | 5.86 |
DAPK1 | 51580_at | 3.42 | 6.04 | 8.03 | 11.32 |
NFATC2IP | 38864_at | 3.26 | 4.83 | 9.58 | 9.19 |
SEL1L | 40689_at | 4.71 | 7.84 | 6.13 | 10.94 |
TM4SF9 | 47746_at | 3.43 | 6.26 | 8.92 | 7.52 |
MLLT2 | 65205_at | 3.43 | 7.13 | 6.57 | 13.01 |
SC4MOL | 46802_at | 22.91 | 7.35 | 5.62 | 6.17 |
--- | 62671_at | 6.38 | 7.13 | 5.74 | 11.03 |
BIRC6 | 46558_at | 5.67 | 8.59 | 7.5 | 5.92 |
MAP4K4 | 51474_at | 4.86 | 4.32 | 8.7 | 8.52 |
MLLT2 | 53300_at | 4.65 | 3.99 | 9.39 | 8.1 |
--- | 52851_at | 8.71 | 5.94 | 6.35 | 6.25 |
MRRF | 51635_at | 4.23 | 4.87 | 7.39 | 8.23 |
ACAS2 | 62783_at | 4.29 | 6.14 | 7.02 | 5.9 |
--- | 60658_at | 3.4 | 6.84 | 5.19 | 9.1 |
SUMO1 | 49551_at | 4.05 | 7.2 | 4.77 | 7.75 |
AR | 1578_g_at | 7.56 | 4.86 | 5.32 | 6.37 |
GALNT7 | 59101_at | 8.41 | 4.12 | 5.11 | 6.54 |
GPR75 | 44203_at | 5.14 | 8.32 | 3.9 | 6.31 |
TBL1XR1 | 65001_r_at | 3.53 | 12.3 | 4.06 | 7.19 |
HSD17B12 | 43292_at | 4.74 | 8.88 | 3.64 | 6.28 |
MRPS28 | 43095_at | 5.79 | 5.39 | 5.58 | 5.14 |
FN1 | 64719_at | 27.07 | 6.02 | 4.05 | 4.93 |
GPR158 | 44214_at | 7.21 | 3.33 | 4.32 | 6.62 |
--- | 48069_at | 6.27 | 9.88 | 3.38 | 4.55 |
FLJ21657 | 58778_at | 4.34 | 5.6 | 6.17 | 5.18 |
MLL5 | 43301_at | 4.76 | 3.61 | 5.87 | 10.34 |
--- | 55761_at | 3.78 | 4.88 | 5.65 | 6.93 |
DLG1 | 47231_at | 3.4 | 4.77 | 6.22 | 5.7 |
MYO5B | 63281_r_at | 3.29 | 6.17 | 4.29 | 6.84 |
--- | 49268_at | 3.55 | 19.86 | 3.61 | 6.75 |
FUS | 43501_at | 3.93 | 3.78 | 6.42 | 8.97 |
CCDC35 | 54684_at | 4.9 | 8.14 | 3.55 | 5.43 |
--- | 43435_at | 6.85 | 4.83 | 4.82 | 5.49 |
SMA4 | 32921_at | 4.68 | 5.53 | 5.74 | 4.26 |
NCOA1 | 45953_at | 6.53 | 4.13 | 3.58 | 6.06 |
S100A8 | 41096_at | 4.22 | 5.89 | 3.8 | 22.58 |
PRKCBP1 | 53493_at | 4.65 | 7.37 | 4.5 | 5.35 |
RNPC2 | 65083_at | 3.18 | 3.96 | 6.01 | 9.19 |
CAMSAP1 | 62630_at | 4.45 | 5.8 | 3.36 | 5.36 |
EEF1G | 41903_at | 5.19 | 4.58 | 4.31 | 5.34 |
EIF5 | 51379_at | 3.44 | 4.08 | 5.62 | 11.07 |
MAML3 | 49879_at | 3.39 | 3.22 | 10.27 | 5.87 |
C21orf106 | 59651_at | 3.19 | 4.02 | 5.23 | 6.44 |
VCIP135 | 42715_at | 3.37 | 3.61 | 5.52 | 8.55 |
FOXO3A | 55502_at | 3.48 | 4.37 | 6.97 | 4.74 |
C7orf20 | 49143_s_at | 4.23 | 4.62 | 4.41 | 5.78 |
GNMT | 46482_at | 3.59 | 4.84 | 4.24 | 4.64 |
DONSON | 48549_at | 4.1 | 3.58 | 4.66 | 5.28 |
--- | 43436_g_at | 4.98 | 3.75 | 3.58 | 5.09 |
PKP4 | 66327_at | 3.31 | 3.88 | 4.56 | 6.2 |
PCBP2 | 55393_at | 3.73 | 3.19 | 4.36 | 6.29 |
CPEB4 | 57169_at | 3.7 | 3.92 | 4.14 | 4.48 |
CUGBP1 | 34683_at | 4.26 | 3.76 | 3.13 | 4.78 |
FALZ | 47458_at | 4.21 | 3.65 | 3.82 | 4.09 |
--- | 51586_at | 3.51 | 4 | 4.99 | 3.89 |
RALA | 39253_s_at | 3.92 | 4.3 | 3.29 | 3.85 |
MLL5 | 45092_at | 4.36 | 3.21 | 4.48 | 3.39 |
PABPC1 | 44806_at | 3.74 | 3.98 | 4.2 | 3.07 |
EIF1AX | 34278_at | 3.99 | 3.47 | 3.84 | 3.19 |
C7orf2 | 42173_at | 3.15 | 3.27 | 5.07 | 4.04 |
--- | 63147_at | 3.25 | 5.4 | 3.12 | 4.04 |
RAD23B | 41157_at | 3.2 | 3.46 | 3.64 | 4.45 |
--- | 61037_at | 3.44 | 3.56 | 3.47 | 3.73 |
NFATC1 | 39143_at | 3.13 | 3.21 | 9.06 | 3.78 |
JARID1A | 50532_at | 3.22 | 3.32 | 3.54 | 4.12 |
PDLIM5 | 37366_at | 3.02 | 3.58 | 3.42 | 3.16 |
Downregulated Transcripts | Â | Â | Â | Â | |
NEFH | 33767_at | -117.15 | -147.36 | -9.9 | -17.18 |
C10orf116 | 32527_at | -35.49 | -29.63 | -46.85 | -66.5 |
KLK11 | 40035_at | -23.65 | -19.24 | -39.73 | -62.15 |
FAM3B | 59657_at | -15.81 | -27.92 | -26.09 | -25.97 |
PGM5 | 52140_at | -23.87 | -26.5 | -44.27 | -17.72 |
MRGPRF | 52946_at | -15.61 | -18.57 | -30.59 | -70.95 |
KRT15 | 37582_at | -21.85 | -20.74 | -19.22 | -33.68 |
PTN | 34820_at | -11.62 | -31.95 | -10.24 | -27.11 |
SELM | 64449_at | -6.36 | -8.4 | -29.23 | -39.36 |
MYLK | 46276_at | -5.87 | -15.22 | -22.57 | -20.86 |
SYNPO2 | 50361_at | -15.14 | -15.77 | -20.15 | -84.14 |
KRT5 | 613_at | -13.21 | -11.12 | -22.66 | -32.96 |
FOS | 2094_s_at | -10.72 | -25.75 | -13.72 | -16.45 |
PKP1 | 51214_at | -11.57 | -16.34 | -11.83 | -17.85 |
--- | 42921_at | -9.96 | -11.67 | -15.61 | -16.5 |
RAB34 | 45269_at | -14.36 | -11.54 | -17.49 | -10.35 |
--- | 48927_at | -10.61 | -14.93 | -8.77 | -21.91 |
ALOX15B | 37430_at | -12.47 | -12.41 | -14.17 | -9.1 |
FOS | 1915_s_at | -7.59 | -26.38 | -11.03 | -12.11 |
TMEM16G | 62387_at | -9.63 | -13.32 | -12.59 | -9.93 |
--- | 64676_at | -17.3 | -9.39 | -6.32 | -13.05 |
SFRP1 | 32521_at | -13.1 | -5.73 | -8.29 | -16.73 |
NDFIP2 | 60510_at | -7.2 | -9.23 | -11.72 | -15.15 |
FHOD3 | 50298_at | -9.96 | -12.84 | -5.59 | -10.96 |
WNT5B | 61292_s_at | -8.72 | -11.85 | -5.42 | -13.92 |
SYNPO2 | 48039_at | -11.04 | -8.8 | -12.64 | -9.34 |
BOC | 64423_s_at | -3.63 | -8.16 | -11.8 | -54.66 |
SLC20A2 | 1137_at | -9.27 | -5.08 | -10.51 | -12.61 |
COL8A2 | 52652_g_at | -7.95 | -9.99 | -11.56 | -9.75 |
--- | 52678_at | -9.69 | -9.99 | -3.76 | -17.93 |
FOS | 1916_s_at | -7.58 | -21.81 | -6.93 | -11.58 |
ARGBP2 | 51939_at | -7.77 | -13.86 | -10.4 | -8.71 |
CTGF | 64342_at | -4.21 | -4.15 | -20.44 | -14.87 |
EPHB6 | 39930_at | -8.61 | -9.66 | -8.32 | -19.41 |
SYNPO2 | 60532_at | -9.77 | -5.54 | -8.77 | -9.03 |
NR4A1 | 280_g_at | -8.68 | -13.49 | -5.82 | -8.58 |
DKFZP564O0823 | 54033_at | -4.67 | -3.72 | -11.83 | -20 |
GSTO2 | 45609_at | -4.73 | -6.81 | -9.6 | -16.18 |
--- | 49321_at | -7.91 | -8.41 | -9.24 | -3.88 |
EGR3 | 40375_at | -9.89 | -7.71 | -8.49 | -6.44 |
SYNPO2 | 61681_at | -7.85 | -8.33 | -4.56 | -18.57 |
PI15 | 58361_at | -3.59 | -4.26 | -12.77 | -11.74 |
FOSB | 36669_at | -8.81 | -6.27 | -7.6 | -8.39 |
OGN | 43507_g_at | -3.56 | -8.26 | -7.19 | -25.54 |
MOXD1 | 36834_at | -5.4 | -11.7 | -10 | -3.85 |
LSAMP | 43930_at | -3.05 | -7.62 | -9.76 | -7.67 |
EGR2 | 37863_at | -7.7 | -5.52 | -7.23 | -15.41 |
DKFZp686D0853 | 49770_at | -10.18 | -7.66 | -7.16 | -4.39 |
LGP1 | 52826_at | -13.75 | -5.94 | -3.83 | -8.11 |
ME3 | 35216_at | -7.45 | -9.26 | -6.54 | -5.32 |
PPP1R14A | 58774_at | -6.68 | -6.14 | -7.31 | -7.87 |
FLJ22386 | 50198_at | -6.8 | -3.64 | -6.98 | -6.65 |
NR4A1 | 279_at | -5.31 | -8.04 | -5.11 | -8.48 |
WFDC1 | 64111_at | -3.79 | -11.21 | -6.64 | -6.66 |
ZFP36 | 40448_at | -6.39 | -6.86 | -7.25 | -3.61 |
CACHD1 | 43554_at | -6.68 | -3.34 | -17.46 | -6.57 |
RLN1 | 35070_at | -6.78 | -11.78 | -5.14 | -6.39 |
--- | 49975_at | -6.43 | -6.16 | -6.74 | -10.11 |
CYBRD1 | 65852_at | -6.43 | -4.79 | -6.7 | -7.23 |
PER3 | 53766_at | -15.43 | -6.79 | -5.56 | -6.29 |
MN1 | 37283_at | -4.47 | -7.36 | -5.55 | -7.48 |
DNCI2 | 35788_at | -4.2 | -8.68 | -3.02 | -10.64 |
MRVI1 | 43966_at | -6.76 | -5.28 | -12.19 | -6.09 |
AZGP1 | 35834_at | -6.32 | -3.86 | -38.18 | -6.18 |
MGC14839 | 48949_at | -8.96 | -4.19 | -8.25 | -3.61 |
SMTN | 64499_s_at | -5.2 | -15.22 | -7.18 | -4.42 |
HSPC157 | 50179_at | -5.66 | -3.18 | -6.63 | -8.09 |
WFDC2 | 33933_at | -5.3 | -6.5 | -5.73 | -6.81 |
BTG2 | 36634_at | -6.99 | -3.13 | -9.25 | -5.22 |
AXIN2 | 64129_at | -4.97 | -6.97 | -7.18 | -4.2 |
PDGFC | 45217_at | -4.32 | -7.53 | -8.81 | -3.97 |
MLLT10 | 63345_at | -7.2 | -5.85 | -5.9 | -3.84 |
BMP7 | 49273_g_at | -4.58 | -4.89 | -6.82 | -13.13 |
MCC | 49504_r_at | -5.9 | -5.71 | -5.08 | -5.84 |
HEXA | 39340_at | -8.15 | -5.65 | -4.18 | -5.88 |
GSTT2 | 1099_s_at | -6.47 | -5.05 | -6.8 | -4.66 |
SSPN | 65647_at | -5.4 | -5.88 | -3.12 | -17.61 |
UPK3A | 36379_at | -5.37 | -4.71 | -5.81 | -6.91 |
PDE5A | 54668_at | -4.44 | -5.17 | -5.87 | -9.56 |
PSD3 | 63832_at | -3.19 | -6.04 | -4.98 | -6.58 |
ALDH7A1 | 61965_at | -5.85 | -5.14 | -5.88 | -3.13 |
FMOD | 33431_at | -7.62 | -4.3 | -4.9 | -6.04 |
TSPAN2 | 53693_at | -6.38 | -4.49 | -4.54 | -6.77 |
DKFZP586H2123 | 40017_at | -6.52 | -6.49 | -4.32 | -3.91 |
EFS | 33883_at | -5.43 | -3.58 | -6.35 | -5.18 |
PODN | 63953_at | -4.16 | -5.3 | -4.84 | -4.98 |
DUSP1 | 1005_at | -6.53 | -16.66 | -3.02 | -3.19 |
SLC22A17 | 58898_s_at | -4.93 | -5.81 | -4.66 | -4.44 |
CDH10 | 47535_at | -4.87 | -3.19 | -8.27 | -4.65 |
--- | 64163_at | -3.66 | -5.03 | -4.79 | -4.7 |
--- | 42587_at | -4.68 | -4.62 | -4.9 | -3.45 |
TSPAN2 | 57331_at | -4.44 | -8.06 | -3.42 | -4.71 |
SORBS1 | 56409_at | -5.45 | -5.7 | -3.17 | -3.53 |
C21orf63 | 50658_s_at | -4.54 | -3.36 | -4.15 | -5.31 |
NBL1 | 37005_at | -3.34 | -4.27 | -4.31 | -6.36 |
CIRBP | 39864_at | -4.38 | -3.53 | -4.19 | -6.8 |
KLF4 | 48587_at | -3.77 | -3.62 | -4.57 | -12.5 |
ZCSL2 | 45320_at | -3.1 | -3.19 | -5.88 | -5.13 |
C12orf10 | 53911_at | -3.62 | -4.44 | -3.86 | -6.46 |
CERKL | 60314_at | -4.68 | -3.03 | -7.37 | -3.62 |
NOV | 39250_at | -3.2 | -3.9 | -4.38 | -7.37 |
EPB41L5 | 60293_at | -4.33 | -4.97 | -3.06 | -3.92 |
WNT5B | 66142_s_at | -3.94 | -3.87 | -4.49 | -4.16 |
ACYP2 | 64090_s_at | -3.36 | -4.33 | -3.68 | -5.82 |
C9orf103 | 56186_at | -3.14 | -4.62 | -4.03 | -3.73 |
FBXO2 | 57811_at | -3.51 | -3.37 | -4.16 | -5.33 |
CD38 | 40323_at | -3.25 | -3.37 | -4.27 | -4.27 |
BCAS1 | 37821_at | -4.96 | -3.19 | -4.26 | -3.34 |
TMSL8 | 36491_at | -3.03 | -4.11 | -3.45 | -7.67 |
ISL1 | 39990_at | -3.12 | -3.78 | -3.61 | -3.91 |
HSPB8 | 56474_at | -3.45 | -3.87 | -3.04 | -7.5 |
B3GALT3 | 53879_at | -3.04 | -4.02 | -3.77 | -3.48 |
CYBRD1 | 50955_at | -3.7 | -3.51 | -3.21 | -5.6 |
EFEMP2 | 63644_at | -3.25 | -3.91 | -3.28 | -3.97 |
TU3A | 45260_at | -3.14 | -3.94 | -3.22 | -4.82 |
LOC57228 | 34176_at | -3.68 | -5.3 | -3.41 | -3.16 |
IER2 | 36097_at | -4.79 | -3.2 | -3.11 | -3.88 |
DKFZP564K1964 | 65860_at | -3.53 | -3.11 | -3.52 | -4.62 |