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Table 2 Top 100 genes differentially expressed in metastatic samples compared to primary tumor samples

From: Gene expression profiles of prostate cancer reveal involvement of multiple molecular pathways in the metastatic process

Gene Symbol Probe_ID d_Value Fold Change
EIF1A 34278_at 19.46 3.56
AR 1577_at 16.04 10.09
AK3 48822_s_at 15.18 3.03
EIF1A 663_at 14.17 2.69
PABPC1 44806_at 14.17 3.57
--- 45092_at 13.16 3.66
HSPD1 37720_at 12.80 2.80
--- 54219_at 12.78 3.23
LCHN 58324_at 12.39 3.49
MLL5 58271_at 12.15 2.45
--- 59350_at 11.98 3.22
--- 49558_at 11.93 2.73
LARP 41829_at 11.60 3.14
IBTK 52482_at 11.41 3.30
GIT1 43805_f_at 11.41 2.49
--- 56056_at 11.31 2.64
FLJ20736 64662_at 11.21 4.32
AR 1578_g_at 11.20 6.19
RALA 39253_s_at 11.19 3.61
HN1 56429_g_at 11.17 2.89
--- 54236_at 11.04 3.82
HSPCA 32316_s_at 10.94 2.68
NUCKS 59778_f_at 10.93 2.44
SOD1 36620_at 10.87 2.16
K-ALPHA-1 32272_at 10.72 2.23
--- 46558_at 10.70 4.70
--- 33207_at 10.62 2.25
VPS28 43061_i_at 10.61 2.19
BASP1 32607_at 10.57 4.15
CBX4 51842_at 10.49 3.06
--- 43680_at 10.45 4.85
GRB2 33855_at 10.44 2.55
--- 63147_at 10.43 3.86
UGT2B15 63915_f_at 10.35 3.07
METTL2 48730_s_at 10.26 2.24
--- 59101_at 10.11 7.12
MLL5 58690_at 10.02 2.24
G3BP 41133_at 10.00 2.25
AK3 32331_at 9.96 2.31
H2AV 39092_at 9.92 3.25
SDCCAG3 43014_at 9.91 6.04
FLJ10613 59989_s_at 9.82 2.20
YY1 891_at 9.70 2.08
--- 49326_at 9.59 2.20
--- 42646_at 9.50 5.45
LOC90462 54342_at 9.44 4.55
--- 55393_at 9.42 3.51
DDX17 41260_at 9.35 4.97
--- 63115_at 9.34 3.07
--- 57160_at 9.34 2.11
ETR101 36097_at -6.98 -3.85
MAGED2 34859_at -7.00 -2.22
--- 50411_at -7.00 -3.57
MGC4342 48094_at -7.01 -2.22
HT023 43461_g_at -7.01 -2.78
SFRP1 32521_at -7.02 -6.25
CRYL1 56407_at -7.04 -2.04
REA 37364_at -7.05 -2.17
ARL5 59499_at -7.08 -2.50
NY-REN-45 57833_s_at -7.09 -2.08
POMT1 46723_at -7.12 -3.23
MRC2 63996_at -7.13 -2.38
B3GALT3 53879_at -7.16 -3.13
NR4A1 280_g_at -7.21 -7.14
MUM2 65822_at -7.23 -2.38
LOC113246 46712_at -7.31 -2.17
GLTSCR2 61109_at -7.33 -2.44
FLJ20542 50164_at -7.36 -3.13
APCDD1 56272_at -7.42 -2.70
AIM1 32112_s_at -7.45 -3.70
FOS 1916_s_at -7.51 -7.69
FOS 1915_s_at -7.56 -9.09
PILB 43370_at -7.56 -2.08
C20orf178 45298_at -7.59 -2.13
B3GAT1 65859_at -7.60 -2.13
FLJ10283 46261_at -7.68 -2.27
RAB34 45269_at -7.71 -10.00
FLJ20069 61701_at -7.71 -3.23
PYGB 59669_at -7.77 -2.70
RPS27L 56410_at -7.80 -2.27
TOMM20 36198_at -7.91 -2.13
--- 43819_g_at -7.91 -3.13
STAT6 41222_at -7.92 -2.78
SELM 64449_at -7.95 -9.09
BOC 52999_at -8.15 -4.17
--- 44746_at -8.20 -2.13
SMBP 46307_at -8.28 -3.23
WNT5B 61330_at -8.34 -3.33
FLJ22386 50198_at -8.43 -4.55
WNT5B 58787_at -8.61 -2.27
ZDHHC4 45807_at -8.81 -2.13
YF13H12 36170_at -8.84 -2.08
HPIP 38063_at -9.04 -2.33
ANXA11 55664_at -9.16 -2.94
WNT5B 66142_s_at -9.33 -4.17
WAS 38963_i_at -9.43 -2.50
JFC1 44820_f_at -9.45 -3.33
JFC1 48805_f_at -9.48 -2.44
WNT5B 61292_s_at -9.86 -7.14
CIRBP 39864_at -10.94 -3.70
  1. Gene expression data from the Affymetrix platform for 25 metastatic and 64 primary tumor samples was analyzed for differential gene expression by SAM. The differentially expressed genes with the lowest FDR were sorted by fold change. The top 100 genes, organized by fold change are shown.