Figure 4
From: Automated array-CGH optimized for archival formalin-fixed, paraffin-embedded tumor material
CGH profiles of four FFPE tumors, hybridized manually and automated. CGH profiles of four FFPE tumors hybridized using our manual and automated methods. Chromosomes (X-axis) versus the log2 ratios (Y-axis) averaged over the two methods. Breakpoint locations and copy number estimates calculated by CGH-segmentation of the manual hybridized tumors (blue) and of the automated hybridized tumors (red), and the average CGH profiles (log2 ratios) of the manual and the automated hybridized tumors (grey).