Table 5 Gene expression of T-est cells in relation to MSSM cells 25 Significant Up-regulated Genes in T-est cells
From: Transcription profiles of non-immortalized breast cancer cell lines
| Â | SAM | Atlas | Â | Â | ||
|---|---|---|---|---|---|---|
Name | Score(d) | Fold | Ratio | Diff | Protein/gene | Gene ontology |
SPINT2 | 9.3646 | 51.350 | 65.437 | 7668 | bikunin; hepatocyte growth factor activator inhibitor 2 | cellular physiological process |
PSME1 | 7.7824 | 3.034 | 3.630 | 3419 | interferon-gamma IEF SSP 5111 | response to stimulus |
SFN | 6.5917 | 37.394 | 25.868 | 3954 | 14-3-3 protein sigma; stratifin | cell communication cellular physiological process metabolism |
JUP | 6.2887 | 4.779 | 5.825 | 4405 | junction plakoglobin; desmoplakin III | cell communication |
TFAP2C | 6.0176 | 89.861 | 108.133 | 1607 | transcription factor erf-1; AP2 gamma transc factor | cell communication metabolism |
SLC25A5 | 5.6914 | 2.028 | 2.512 | 4761 | ADP/ATP carrier protein | cellular physiological process |
GSTZ1 | 5.5683 | 11.704 | 13.413 | 1986 | glutathione transferase zeta 1 | metabolism |
TBRG4 | 5.4262 | 2.362 | 2.859 | 3099 | cell cycle progression 2 protein (CPR2) | Gen with GO but NOT at level 3 biological process |
EDG4 | 5.3459 | 7.169 | 8.197 | 2044 | G protein-coupled receptor EDG4 | cell communication |
RPS6KA1 | 5.0882 | 2.030 | 2.528 | 1933 | ribosomal S6 kinase 1 | cell communication metabolism |
CTSD | 4.9896 | 3.430 | 4.120 | 6462 | cathepsin D precursor | metabolism |
HDGF | 4.8236 | 2.112 | 2.590 | 2185 | hepatoma-derived growth factor | cell communication cellular physiological process |
PCTK1 | 4.5911 | 2.202 | 2.648 | 2444 | serine/threonine-protein kinase PCTAIRE 1 | cellular physiological process metabolism |
LITAF | 4.4875 | 3.318 | 3.923 | 2166 | PIG7 | cell communication metabolism regulation of cellular process |
PTPN6 | 4.4289 | 15.939 | 12.218 | 1391 | protein-tyrosine phosphatase1C | cell communication cellular physiological process metabolism |
RFC2 | 4.3235 | 2.469 | 2.800 | 2036 | replication factor C 40-kDa subunit (RFC40) | cellular physiological process metabolism |
RARG | 4.3142 | 2.640 | 3.020 | 1085 | retinoic acid receptor gamma 1 | metabolism |
ADRBK1 | 4.2331 | 3.963 | 4.121 | 1211 | G protein-coupled receptor kinase 2 (GRK2) | cell communication metabolism |
CKS1B | 4.2166 | 3.370 | 4.301 | 3341 | cyclin-dependent kinase regulatory subunit 1 | Gen with GO but NOT at level 3 biological process |
RPS21 | 4.1856 | 2.210 | 2.674 | 2531 | ribosomal protein S21 | metabolism |
AURKB | 4.1129 | 4.052 | 5.168 | 1980 | aurora- & IPL1-like protein kinase1; ARK2 | cellular physiological process metabolism |
PPP2R4 | 3.9781 | 3.481 | 4.068 | 2433 | phosphotyrosyl phosphatase activator | metabolism |
FASN | 3.6731 | 2.953 | 3.615 | 4590 | fatty acid synthase | metabolism |
GDF15 | 3.6008 | 5.032 | 5.878 | 10268 | macrophage inhibitory cytokine 1 (MIC1) | Gen with GO but NOT at level 3 biological process |
MAPK13 | 3.5903 | 5.374 | 6.228 | 1652 | stress-activated protein kinase 4 (SAPK4) | cell communication cellular physiological process metabolism response to stimulus |