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Table 5 Genes regulated by SSeCKS in v-Src transformed cellsa A value ≥ 2 represents induction; a value ≤ 0.5 represents repression

From: SSeCKS/Gravin/AKAP12 attenuates expression of proliferative and angiogenic genes during suppression of v-Src-induced oncogenesis

Gene

Symbol

Modulation

Signal transduction

  

   Cytokine inducible kinase

Plk3

52.35

   G protein-coupled receptor 56

Gpr56

49.00*

   Guanine nucleotide binding protein (G protein), gamma 2 subunit

Gng2

7.16*

   Protein tyrosine phosphatase, non-receptor type 11

Ptpn11

5.86

   Serine/threonine kinase 4

Stk4

3.97

   RAB20, member RAS oncogene family

Rab20

3.92

   Phosphatidylinositol-4-phosphate 5-kinase, type 1 beta

Pip5k1b

3.50

   Growth arrest and DNA-damage-inducible 45 alpha

Gadd45a

3.43

   Butyrate-induced transcript 1

Ptplad1

3.29*

   Suppressor of cytokine signaling 3

Socs3

2.07***

   Serine/arginine-rich protein specific kinase 2

Srpk2

0.45

   Mitogen activated protein kinase kinase 6

Map2k6

0.44

   Regulator of G-protein signaling 2

Rgs2

0.38

   Ras and Rab interactor 2

Rin2

0.33

   Dual specificity phosphatase 10

Dusp10

0.17

   Myristoylated alanine rich protein kinase C substrate

Marcks

0.12*

Cell cycle and transcriptional regulator

  

   Histone 1, H2bp

Hist1h2bp

3.61

   Cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)

Cdkn2d

2.46*

   Retinoblastoma binding protein 7

Rbbp7

2.39

   Histone 2, H3c2

Hist2h3c2

2.28

   v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F

Maff

2.28***

   Inhibitor of DNA binding 2

Id2

0.44***

   Transcription factor AP-4 (activating enhancer-binding protein 4)

Tcfap4

0.26

   Cell division cycle 20 homolog (S. cerevisiae)

Cdc2a

0.25*

   Basic helix-loop-helix transcription factor 6

Atoh6

0.24***

   High mobility group box 3

Hmgb3

0.24*/**

   Hypoxia inducible factor 1, alpha subunit

Hif1a

0.22

   Kruppel-like factor 7 (ubiquitous)

Klf7

0.10

Growth factor and receptor

  

   Chemokine (C-C motif) ligand 2

Ccl2

4.26

   Nerve growth factor, beta

Ngfb

2.38*

   Glial cell line derived neurotrophic factor family receptor alpha 1

Gfra1

0.33*/**

   Interleukin 1 receptor-like 1

Il1rl1

0.23*/**

   Platelet derived growth factor receptor, beta polypeptide

Pdgfrb

0.18*

   Transforming growth factor, beta 2

Tgfb2

0.14

Others

  

   S100 calcium binding protein A8 (calgranulin A)

S100a8

16.22

   Fatty acid desaturase 3

Fads3

8.00

   Heat shock protein 4

Hspa4

4.29

   Deubiquitinating enzyme 1

Dub1

3.23

   alpha fetoprotein

Afp

0.50*/**

   Tissue inhibitor of metalloproteinase 3

Timp3

0.33

   HIF-1 responsive RTP801

Ddit4

0.26

   5-azacytidine induced gene 1

Azi1

0.24

   Growth differentiation factor 5

Gdf5

0.18

   Growth arrest specific 1

Gas1

0.18

   Caspase 7

Casp7

0.18

   retinitis pigmentosa 1 homolog (human)

Rp1h

0.12

   protocadherin 18

Pcdh18

0.07

  1. a, S24/ts72v-Src MEF, 35 °C, + vs – tet.
  2. *, similar effects when compared to SSeCKS overexpression alone (Table 3).
  3. **, opposite effects when compared to v-Src activation (Table 4).
  4. ***, similar effects when compared to v-Src activation (Table 4).