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Table 3 Common nsSNPs with a possible role in cancer predisposition. Only the information derived from the studies on the protein function as well as the studies with a suggestion of disease-association have been included. 1 and 2 under the frequency column represents the nsSNP with minor allele frequencies <5% and ≥5%, respectively [20-21].

From: Phosphorylation states of cell cycle and DNA repair proteins can be altered by the nsSNPs

Pathway

Gene

nsSNP

Possible effect on phosphorylation

Frequency

Functional analysis

Cancer risk association

DNA repair

BRCA1

P871L

Abolishes at S869

2

-

-

 

ERCC4

P379S

Creates at S379

1 and 2

-

-

 

IGHMBP2

T671A

Abolishes at S672

2

-

-

 

OGG1

S326C

Abolishes at S326

2

Yamane et al. [55]

Sugimura et al. [52];

Xing et al. [53];

Elahi et al. [54]

 

XRCC3

T241M

Abolishes and T241

2

Yoshihara et al. [51]

Winsey et al. [49];

Kuschel et al. [47];

Shen et al. [50];

Figueiredo et al. [48]

Cell cycle

CCND3

S259A

Abolishes at S359

2

-

-

 

CDKN1A

S31R

Abolishes at S31

2

Chedid et al. [59]

Wu et al. [58];

Roh et al. [56];

Tsai et al. [57]