Table 5 Transcription profile of untreated AIDS-KS compared with KS-24 and normal skin (NS) a
From: Primary effect of chemotherapy on the transcription profile of AIDS-related Kaposi's sarcoma
Tag | Identification | KS-24 (treated) | KS (untreated) | NS |
|---|---|---|---|---|
GACCGCAGGA | Collagen, type IV, α1 | 0 | 117 | 1 |
GTGCGCTGAG | MHC, class I C | 1 | 93 | 1 |
CGTGGGTGGG | Heme oxygenase (decyling) 1 | 0 | 171 | 5 |
CTCTAAGAAG | Complement component 1q subcomponent α peptide | 0 | 40 | 1 |
GAGAGTGTCT | Tissue inhibitor of metalloproteinase, collagenase inhibitor (TIMP) | 1 | 31 | 1 |
GCGGTTGTGG | Lysosomal-associated multispanning membrane protein 5 | 0 | 28 | 1 |
CGGGGTGGCC | Cartilage oligomeric matrix protein | 0 | 28 | 0 |
GCAAGAAAGT | Hemoglobin β | 0 | 24 | 0 |
ACCGCCGTGG | Cytochrome b-245, α polypeptide | 0 | 22 | 1 |
CCGGGTGATG | ATX1 (antioxidant protein1) | 5 | 22 | 1 |
GCTGCGGTCC | H2A histone family member | 0 | 19 | 1 |
GTGTTAACCA | Ribosomal protein L15 | 13 | 19 | 1 |
ACCATTCTGC | Interferon induced transmembrane protein 2 (1-8D) | 0 | 19 | 1 |
GGCTCCCACT | Heat shock 90 kD protein1, beta | 8 | 18 | 0 |
CGGGATTCCT | Phospholipid transfer protein | 0 | 18 | 1 |
GCTGGTGCCT | Thy-1 cell surface antigen | 0 | 17 | 1 |
TACAGTATGT | Glutamate-ammonia ligase, glutamine synthase | 11 | 17 | 1 |
GAGCAGCGCC | S100 calcium binding protein A7 (Psoriasin) | 0 | 101 | 8 |
ACTTTAGATG | Collagen type VI α3 | 0 | 33 | 3 |
GTGGCCACGG | S100 calcium binding protein A9 (Calgranulin) | 1 | 96 | 8 |
GCCCCTCCGG | 16,7 Kd protein | 3 | 16 | 1 |
AGTAGCCGTG | No reliable matches | 13 | 16 | 1 |
ACAGGGTGAC | Endothelial differentiation-related factor 1 | 3 | 15 | 1 |
TGGAGAAGAG | Thioredoxin interacting protein | 0 | 15 | 1 |
TGTCATCACA | Lysyl oxidase-like 2 | 0 | 15 | 1 |
TCAGACGCAG | Prothymosin α | 91 | 56 | 6 |