Primary effect of chemotherapy on the transcription profile of AIDS-related Kaposi's sarcoma

BMC Cancer

Table 1 Frequency distribution of tag counts in the four KS and control SAGE libraries

Library^a	Tag count >75	Tag count = 25 – 75	Tag count = 5 – 24	Tag count = 2 – 4	Tag count = 1	Total tags^b	Unique tags^c
KS-24	45	124	1055	4484	15102	47298	20810
KS-48	34	134	892	3926	16498	46671	21484
KSa	57	143	1317	3518	11326	49335	16361
KSb	67	151	1146	3444	12075	48814	16883
CD4	39	135	999	4539	17956	51886	23668
NS	41	128	866	2908	11373	39492	15318

^a Libraries are: KS-24, AIDS-KS tissue 24 hrs after chemotherapy; KS-48, AIDS-KS tissue 48 hrs after chemotherapy; KSa and KSb, AIDS-KS tissue from two untreated patients, CD4, isolated CD4+ T-cells from a single donor; NS, normal skin from three breast reductions. ^b Tag numbers after elimination of linker-based tags and duplicate ditags. ^c Number of unique tags identified in each library.

ISSN: 1471-2407