Variables | AA vs.GG | GA vs. GG | AA + AG vs.GG | AA vs.GA + GG | A vs.G | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Study | Case/control | I 2 | Phet | OR (95% CI) | Case/control | I 2 | Phet | OR (95% CI) | Case/control | I 2 | Phet | OR (95% CI) | Case/control | I 2 | Phet | OR (95% CI) | Case/control | I 2 | Phet | OR (95% CI) | |
Overall | 30 | 6538/9948 | 57 | 0.01 | 5.11 (2.08-12.56)* | 7005/10442 | 77 | <0.001 | 1.45 (1.05-1.99)* | 7117/10442 | 83 | <0.001 | 1.63 (1.16-2.30)* | 7117/10442 | 58 | 0.01 | 4.41 (1.80-10.84)* | 14234/20884 | 86 | <0.001 | 1.77 (1.23-2.25)* |
Overall in HWE | 29 | 6449/9699 | 61 | 0.003 | 5.14 (1.67-15.86)* | 6873/10138 | 69 | <0.001 | 1.35 (1.01-1.81)* | 6971/10154 | 79 | <0.001 | 1.53 (1.10-2.12)* | 6971/10154 | 60 | 0.004 | 4.80 (1.58-14.55)* | 13942/20308 | 85 | <0.001 | 1.70 (1.17-2.46)* |
Cancer type | |||||||||||||||||||||
Breast | 4 | 623/501 | 0 | 0.34 | 1.44 (0.38-5.44) | 692/550 | 53 | 0.12 | 1.03 (0.70-1.52) | 698/553 | 60 | 0.08 | 1.05 (0.72-1.53) | 698/553 | 0 | 0.36 | 1.41 (0.37-5.40) | 1396/1466 | 65 | 0.56 | 1.07 (0.76-1.52) |
Cervical | 3 | 708/819 | 0 | 0.99 | 0.35 (0.04-3.39) | 740/871 | 57 | 0.13 | 0.62 (0.40-0.98) | 740/837 | 51 | 0.15 | 0.60 (0.38-0.94) | 740/837 | 0 | 0.99 | 0.36 (0.04-3.450 | 1480/1746 | 42 | 0.19 | 0.59 (0.38-0.91) |
Oral | 4 | 517/633 | 75 | 0.02 | 72.11 (2.08-2502.44)* | 542/670 | 70 | 0.02 | 3.17 (1.26-7.92)* | 583/670 | 92 | <0.001 | 7.92 (1.58-39.64)* | 583/670 | 75 | 0.02 | 58.05 (1.70-1985.77)* | 1166/1340 | 96 | 0.01 | 9.66 (1.31-71.15)* |
Prostate | 3 | 1866/2230 | - | - | - | 1927/2280 | 1 | 0.37 | 1.42 (0.97-2.07) | 1928/2280 | 7 | 0.34 | 1.44 (0.98-2.10) | 1928/2280 | - | - | - | 3856/4560 | 10 | 0.33 | 1.45 (0.99-2.11) |
Renal | 4 | 1016/1267 | 0 | 0.95 | 5.10 (2.21-11.73) | 1123/1354 | 92 | <0.001 | 1.51 (0.45-5.05)* | 1139/1364 | 92 | <0.001 | 1.58 (0.49-5.04)* | 1139/1364 | 0 | 0.76 | 3.09 (1.38-6.92) | 2278/2728 | 89 | <0.001 | 1.53 (0.60-3.92)* |
Renal in HWE | 3 | 937/1018 | - | - | - | 991/1076 | 0 | 0.42 | 1.00 (0.69-1.47) | 993/1076 | 0 | 0.6 | 1.04 (0.71-1.52) | 993/1076 | - | - | - | 1986/2152 | 0 | 0.78 | 1.07 (0.74-1.55) |
Lung | 3 | 405/481 | 0 | 0.87 | 5.42 (2.74-10.70) | 466/555 | 0 | 0.57 | 1.72 (1.22-2.41) | 509/566 | 0 | 0.46 | 2.14 (1.56-2.94) | 509/566 | 0 | 0.79 | 4.52 (2.31-8.83) | 1018/1132 | 0 | 0.48 | 2.27 (1.74-2.95) |
Colorectal | 2 | 545/2327 | - | - | - | 554/2336 | - | - | - | 554/2336 | 0 | 0.45 | 0.97 (0.57-1.63) | 554/2336 | - | - | - | 1108/4672 | - | - | - |
Pancreatic | 2 | 255/391 | - | - | - | 319/423 | 82 | 0.02 | 1.61 (0.24-10.76)* | 322/423 | 63 | 0.1 | 3.14 (1.99-4.97) | 322/423 | - | - | - | 644/846 | 0 | 0.42 | 3.08 (1.98-4.78) |
Other | 7 | 593/1377 | - | - | - | 642/1377 | 74 | <0.001 | 1.53 (0.65-3.59)* | 644/1377 | 72 | <0.001 | 1.57 (0.70-3.53)* | 644/1377 | - | - | - | 1288/2754 | 69 | 0.01 | 1.57 (0.75-3.30)* |
Ethnicity | |||||||||||||||||||||
Asian | 15 | 3607/4263 | 13 | 0.33 | 3.50 (2.05-5.98) | 4010/4614 | 74 | <0.001 | 1.44 (1.04-1.99)* | 4063/4630 | 76 | <0.001 | 1.49 (1.07-2.08)* | 4063/4630 | 0 | 0.45 | 3.12 (1.83-5.32) | 8126/9260 | 77 | <0.001 | 1.49 (1.08-2.05)* |
Caucasian | 13 | 1829/4357 | 0 | 0.69 | 6.63 (3.11-14.12) | 1926/4450 | 81 | <0.001 | 1.36 (0.58-3.19)* | 1948/4460 | 82 | <0.001 | 1.45 (0.69-3.04)* | 1948/4460 | 0 | 0.49 | 4.21 (2.04-8.71) | 3896/8920 | 75 | <0.001 | 1.65 (0.84-3.24)* |
Caucasian in HWE | 12 | 1750/4108 | 0 | 0.74 | 12.40 (2.19-70.22) | 1794/4172 | 68 | 0.01 | 1.10 (0.48-2.49)* | 1802/4172 | 67 | 0.01 | 1.22 (0.62-2.37)* | 1802/4172 | 0 | 0.79 | 11.37 (2.02-63.93) | 3604/8344 | 68 | 0.01 | 1.65 (1.17-2.32)* |
Source of control | |||||||||||||||||||||
HB | 13 | 3197/3945 | 45 | 0.12 | 1.54 (0.35-6.70) | 3510/4234 | 77 | <0.001 | 1.37 (0.92-2.05)* | 3554/4248 | 79 | <0.001 | 1.40 (0.93-2.11)* | 3554/4248 | 35 | 0.19 | 3.13 (1.74-5.62) | 7108/8496 | 79 | <0.001 | 1.38 (0.93-2.05)* |
PB | 17 | 3133/5705 | 66 | 0.01 | 11.55 (6.62-20.12)* | 3295/5882 | 78 | <0.001 | 1.51 (0.88-2.58)* | 3563/6194 | 85 | <0.001 | 1.90 (1.06-3.39)* | 3563/6194 | 69 | 0.002 | 10.27 (2.42-43.63)* | 6726/11788 | 89 | <0.001 | 2.25 (1.18-4.29)* |
PB in HWE | 16 | 3054/5456 | 67 | 0.006 | 15.51 (2.53-94.94)* | 3163/5604 | 60 | 0.01 | 1.34 (0.85-2.11)* | 3417/5906 | 81 | <0.001 | 1.71 (0.97-3.03)* | 3417/5906 | 66 | 0.007 | 14.20 (2.38-84.61)* | 6434/11212 | 89 | <0.001 | 2.33 (1.91-2.84)* |