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Table 3 miRNA expression in RMS tumours

From: Deep Sequencing the microRNA profile in rhabdomyosarcoma reveals down-regulation of miR-378 family members

A

     

B

  

miRNA_ID

log 2 FC

log 2 CPM

miRNA_ID

log 2 FC

log 2 CPM

miRNA_ID

log 2 FC

log 2 CPM

hsa-miR-885-5p

−6.93

7.34

hsa-miR-4256

−2.95

9.13

hsa-miR-4327

9.95

3.61

hsa-miR-144-5p

−5.62

8.27

hsa-miR-218-5p

−2.95

11.07

hsa-miR-508-3p

9.63

3.40

hsa-miR-451a

−5.52

15.36

hsa-miR-126-3p

−2.93

13.30

hsa-miR-383

7.99

6.17

hsa-miR-1

−5.47

16.81

hsa-miR-5787

−2.93

3.93

hsa-miR-503-5p

5.68

9.48

hsa-miR-378a-5p

−5.34

11.64

hsa-miR-22-5p

−2.88

9.77

hsa-miR-154-3p

5.19

10.09

hsa-miR-223-3p

−5.12

12.89

hsa-miR-30e-3p

−2.81

9.06

hsa-miR-493-5p

4.89

11.33

hsa-miR-124-3p

−5.06

5.79

hsa-miR-139-5p

−2.79

9.02

hsa-miR-450a-5p

4.88

9.11

hsa-miR-378a-3p

−4.92

13.79

hsa-miR-30b-3p

−2.77

3.39

hsa-miR-500b

4.68

9.25

hsa-miR-378f

−4.80

7.02

hsa-miR-203a

−2.72

5.26

hsa-miR-335-3p

4.60

9.51

hsa-miR-378 h

−4.53

4.42

hsa-miR-185-5p

−2.71

8.80

hsa-miR-376c-5p

4.59

4.14

hsa-miR-378c

−4.47

12.37

hsa-miR-652-3p

−2.68

7.09

hsa-miR-483-3p

4.55

13.10

hsa-miR-599

−4.39

4.93

hsa-miR-4484

−2.64

3.45

hsa-miR-376a-2-5p

4.55

5.55

hsa-miR-144-3p

−4.36

7.41

hsa-miR-208b

−2.63

5.74

hsa-miR-503-3p

4.55

4.22

hsa-miR-378i

−4.29

6.47

hsa-miR-24-1-5p

−2.60

5.69

hsa-miR-3182

4.43

7.92

hsa-miR-378d

−4.29

8.81

hsa-miR-30a-3p

−2.60

8.81

hsa-miR-542-3p

4.36

10.77

hsa-miR-486-5p

−4.14

11.78

hsa-miR-29a-3p

−2.59

13.25

hsa-miR-149-5p

4.33

11.39

hsa-miR-133a

−4.05

14.25

hsa-miR-16-2-3p

−2.55

8.81

hsa-miR-501-5p

3.81

11.03

hsa-miR-95

−3.96

9.35

hsa-miR-628-3p

−2.54

2.47

hsa-miR-483-5p

3.48

9.68

hsa-miR-378b

−3.86

5.55

hsa-miR-29b-2-5p

−2.54

5.75

   

hsa-miR-29c-5p

−3.82

7.35

hsa-miR-133b

−2.53

11.85

C

  

hsa-miR-378e

−3.82

9.31

hsa-miR-4300

−2.51

4.76

miRNA_ID

log 2 FC

log 2 CPM

hsa-miR-142-5p

−3.68

8.68

hsa-miR-491-5p

−2.32

2.56

hsa-miR-335-5p

−3.25

12.19

hsa-miR-4461

−3.66

2.84

hsa-miR-873-3p

−2.31

3.06

hsa-miR-489

−3.30

7.64

hsa-miR-378 g

−3.64

4.58

hsa-miR-3687

−2.31

2.75

hsa-miR-375

−4.11

8.33

hsa-miR-944

−3.56

2.73

hsa-miR-5095

−2.27

4.86

hsa-miR-135a-5p

−5.38

10.49

hsa-miR-486-3p

−3.54

6.75

hsa-miR-29b-1-5p

−2.26

3.58

hsa-miR-9-3p

−6.07

6.89

hsa-miR-29c-3p

−3.54

12.27

hsa-miR-664a-5p

−2.25

3.52

hsa-miR-9-5p

−7.53

8.95

hsa-miR-4306

−3.53

3.61

hsa-miR-664a-3p

−2.24

7.74

hsa-miR-499a-3p

6.21

7.83

hsa-miR-4516

−3.51

3.57

hsa-miR-4315

−2.22

4.39

hsa-miR-499a-5p

6.07

9.97

hsa-miR-193b-5p

−3.51

6.08

hsa-miR-3714

−2.21

2.64

hsa-miR-432-5p

3.58

9.47

hsa-miR-139-3p

−3.49

2.94

hsa-miR-4787-3p

−2.18

2.50

hsa-miR-296-5p

3.37

8.53

hsa-miR-616-5p

−3.41

4.29

hsa-miR-7-5p

−2.14

6.83

hsa-miR-95

3.30

7.89

hsa-miR-22-3p

−3.39

9.05

hsa-miR-7-1-3p

−2.13

7.81

hsa-miR-31-5p

3.22

8.09

hsa-miR-150-5p

−3.33

10.54

hsa-miR-7-2-3p

−2.06

3.97

   

hsa-miR-548v

−3.27

3.04

hsa-miR-23c

−1.98

9.82

   

hsa-miR-3117-3p

−3.05

1.97

hsa-miR-584-5p

−1.96

2.87

   

hsa-miR-628-5p

−3.03

5.41

hsa-miR-137

−1.95

5.54

   

hsa-miR-1281

−3.02

3.73

hsa-miR-3607-5p

−1.64

10.85

   

hsa-miR-548z

−3.01

3.45

hsa-miR-935

−1.59

5.49

   

hsa-miR-126-5p

−3.00

12.54

      
  1. (A) miRNA species expressed at lower levels in RMSs vs. NSM (ARMS and ERMS are collectively considered); (B) miRNA species expressed at higher levels in RMSs vs. NSM (ARMS and ERMS are collectively considered); (C) differentially expressed miRNAs in ERMS vs. ARMS tumours.