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Table 3 Comparison of PIK3R1 expression status and alterations of other genes of interest

From: PIK3R1 underexpression is an independent prognostic marker in breast cancer

  

Number of patients (%)

 

Total population (%)

PIK3R1underexpression

PIK3R1non-underexpression

P-value a

Total

458 (100.0)

283 (61.8)

175 (38.2)

 

EGFR values: median [range]

0.2 (0.0-112.9)

0.1 (0.0-7.3)

0.2 (0.0-112.9)

 

Underexpressed tumors (%)

389 (84.9)

250 (88.3)

139 (79.4)

0.0096

Non-underexpressed tumors (%)

69 (15.1)

33 (11.7)

36 (20.6)

PDK1 values: median [range]

1.0 (0.0-14.7)

1.2 (0.1-14.7)

0.9 (0.0-6.2)

 

Underexpressed tumors (%)

61 (13.3)

26 (9.2)

35 (20.0)

0.000004

Normally expressed tumors (%)

316 (69.0)

189 (66.8)

127 (72.6)

Overexpressed tumors (%)

81 (17.7)

68 (24.0)

13 (7.4)

AKT1 values: median [range]

1.5 (0.0-11.1)

1.4 (0.4-10.0)

1.6 (0.0-11.1)

 

Non-overexpressed tumors (%)

342 (74.7)

216 (76.3)

126 (72.0)

NS

Overexpressed tumors (%)

116 (25.3)

67 (23.7)

49 (28.0)

AKT2 values: median [range] b

1.0 (0.7-2.3)

1.6 (0.5-10.6)

1.8 (0.5-12.2)

 

Non-overexpressed tumors (%)

293 (64.3)

189 (67.0)

104 (59.8)

NS

Overexpressed tumors (%)

163 (35.7)

93 (33.0)

70 (40.2)

AKT3 values: median [range] b

1.0 (0.4-1.9)

0.3 (0.0-2.4)

0.5 (0.1-7.5)

 

Underexpressed tumors (%)

306 (67.1)

215 (76.2)

91 (52.3)

0.00000013

Non-underexpressed tumors (%)

150 (32.9)

67 (23.8)

83 (47.7)

GOLPH3 values: median [range]

1.4 (0.3-6.7)

1.3 (0.3-5.2)

1.7 (0.7-6.7)

 

Non-overexpressed tumors (%)

369 (80.6)

242 (85.5)

127 (72.6)

0.00067

Overexpressed tumors (%)

89 (19.4)

41 (14.5)

48 (27.4)

P70S6K values: median [range]

1.2 (0.0-19.6)

1.2 (0.4-19.6)

1.2 (0.0-8.9)

 

Non-overexpressed tumors (%)

375 (81.9)

226 (79.9)

149 (85.1)

NS

Overexpressed tumors (%)

83 (18.1)

57 (20.1)

26 (14.9)

WEE1 values: median [range]

0.8 (0.2-6.9)

0.7 (0.2-4.1)

0.9 (0.2-6.9)

 

Underexpressed tumors (%)

84 (18.3)

68 (24.0)

16 (9.1)

0.000063

Non-underexpressed tumors (%)

374 (81.7)

215 (76.0)

159 (90.9)

PTEN values: median [range]

0.8 (0.1-9.0)

0.7 (0.1-9.0)

1.0 (0.4-5.8)

 

Underexpressed tumors (%)

78 (17.0)

71 (25.1)

7 (4.0)

< 0.0000001

Non-underexpressed tumors (%)

380 (83.0)

212 (74.9)

168 (96.0)

PIK3CA

    

Wild-type (%)

307 (67.0)

205 (72.4)

102 (58.3)

0.0017

Mutation (%)

151 (33.0)

78 (27.6)

73 (41.7)

PIK3R1 c

    

Wild-type (%)

444 (97.8)

276 (98.6)

168 (96.6)

NS

Mutation (%)

10 (2.2)

4 (1.4)

6 (3.4)

AKT1 d

    

Wild-type (%)

442 (96.7)

272 (96.5)

170 (97.1)

NS

Mutation (%)

15 (3.3)

10 (3.5)

5 (2.9)

  1. aChi2 test. NS: not significant.
  2. bData available in 456 samples.
  3. cData available in 454 samples.
  4. dData available in 457 samples.
  5. The bold numbers stress important finding or overall characterisation of a group or p-value.