From: Common low-penetrance risk variants associated with breast cancer in Polish women
dbSNP IDa | Region | Geneb | MA | G1 vs G2 | OR (95% CI) | Allelic | Cochran-Armitage | ||
---|---|---|---|---|---|---|---|---|---|
p-value | p-valuecor | p-value | p-valuecor | ||||||
rs10941679 | 5p12 | Â | 0.24 | C vs N | 1.14 (1.01-1.28) | 2.97E-02 | 4.75E-01 | 2.71E-02 | 4.34E-01 |
 |  |  |  | C noMut vs N | 1.15 (1.02-1.30) | 2.29E-02 | 3.66E-01 | 2.04E-02 | 3.27E-01 |
 |  |  |  | S vs N | 1.17 (1.01-1.35) | 4.25E-02 | 6.80E-01 | 3.94E-02 | 6.31E-01 |
 |  |  |  | S noMut vs N | 1.20 (1.03-1.40) | 2.06E-02 | 3.29E-01 | 1.87E-02 | 2.99E-01 |
rs2736098 | 5p15.33 | TERT | 0.36 | C vs N | 0.77 (0.68-0.88) | 5.81E-05 | 9.30E-04 | 5.51E-05 | 8.82E-04 |
 |  |  |  | C noMut vs N | 0.78 (0.69-0.89) | 2.37E-04 | 3.78E-03 | 2.25E-04 | 3.60E-03 |
 |  |  |  | C with Mut vs N | 0.74 (0.57-0.94) | 1.70E-02 | 2.73E-01 | 1.55E-02 | 2.48E-01 |
 |  |  |  | F vs N | 0.81 (0.69-0.93) | 4.68E-03 | 7.49E-02 | 4.56E-03 | 7.30E-02 |
 |  |  |  | F noMut vs N | 0.80 (0.68-0.94) | 8.63E-03 | 1.38E-01 | 8.25E-03 | 1.32E-01 |
 |  |  |  | S vs N | 0.74 (0.63-0.87) | 2.61E-04 | 4.17E-03 | 2.38E-04 | 3.80E-03 |
 |  |  |  | S noMut vs N | 0.76 (0.64-0.90) | 1.46E-03 | 2.34E-02 | 1.36E-03 | 2.18E-02 |
rs13281615 | 8q24.21 | Â | 0.45 | C vs N | 1.19 (1.07-1.32) | 1.23E-03 | 1.97E-02 | 1.17E-03 | 1.88E-02 |
 |  |  |  | C noMut vs N | 1.21 (1.08-1.35) | 7.23E-04 | 1.16E-02 | 6.77E-04 | 1.08E-02 |
 |  |  |  | F vs N | 1.20 (1.06-1.35) | 5.19E-03 | 8.31E-02 | 5.24E-03 | 8.39E-02 |
 |  |  |  | F noMut vs N | 1.22 (1.06-1.39) | 4.60E-03 | 7.36E-02 | 4.53E-03 | 7.25E-02 |
 |  |  |  | S vs N | 1.18 (1.03-1.35) | 1.61E-02 | 2.57E-01 | 1.42E-02 | 2.27E-01 |
 |  |  |  | S noMut vs N | 1.20 (1.04-1.38) | 1.09E-02 | 1.74E-01 | 9.61E-03 | 1.54E-01 |
rs1219648 | 10q26 | FGFR2 | 0.41 | C vs N | 1.30 (1.17-1.45) | 1.01E-06 | 1.62E-05 | 1.13E-06 | 1.81E-05 |
 |  |  |  | C noMut vs N | 1.36 (1.22-1.52) | 7.20E-08 | 1.15E-06 | 7.95E-08 | 1.27E-06 |
 |  |  |  | F vs N | 1.26 (1.11-1.43) | 4.21E-04 | 6.73E-03 | 3.76E-04 | 6.01E-03 |
 |  |  |  | F noMut vs N | 1.33 (1.16-1.53) | 4.02E-05 | 6.43E-04 | 3.24E-05 | 5.18E-04 |
 |  |  |  | S vs N | 1.36 (1.19-1.56) | 7.32E-06 | 1.17E-04 | 8.53E-06 | 1.36E-04 |
 |  |  |  | S noMut vs N | 1.39 (1.20-1.59) | 5.58E-06 | 8.92E-05 | 6.76E-06 | 1.08E-04 |
rs2981582 | 10q26 | FGFR2 | 0.41 | C vs N | 1.31 (1.17-1.45) | 9.10E-07 | 1.46E-05 | 1.17E-06 | 1.88E-05 |
 |  |  |  | C noMut vs N | 1.35 (1.21-1.51) | 1.20E-07 | 1.91E-06 | 1.54E-07 | 2.46E-06 |
 |  |  |  | F vs N | 1.26 (1.11-1.43) | 4.05E-04 | 6.48E-03 | 4.09E-04 | 6.54E-03 |
 |  |  |  | F noMut vs N | 1.32 (1.15-1.51) | 6.49E-05 | 1.04E-03 | 6.11E-05 | 9.77E-04 |
 |  |  |  | S vs N | 1.37 (1.19-1.56) | 5.70E-06 | 9.12E-05 | 7.67E-06 | 1.23E-04 |
 |  |  |  | S noMut vs N | 1.38 (1.20-1.59) | 5.69E-06 | 9.11E-05 | 7.97E-06 | 1.27E-04 |
rs3817198 | 11p15.5 | LSP1 | 0.34 | F vs N | 1.16 (1.02-1.32) | 2.45E-02 | 3.92E-01 | 2.36E-02 | 3.78E-01 |
 |  |  |  | F noMut vs N | 1.16 (1.00-1.33) | 4.46E-02 | 7.14E-01 | 4.34E-02 | 6.94E-01 |
rs3803662 | 16q12.1 | TOX3 | 0.30 | C vs N | 1.13 (1.01-1.27) | 3.14E-02 | 5.02E-01 | 3.22E-02 | 5.15E-01 |
 |  |  |  | C noMut vs N | 1.16 (1.03-1.31) | 1.30E-02 | 2.08E-01 | 1.35E-02 | 2.16E-01 |
 |  |  |  | F noMut vs N | 1.16 (1.00-1.34) | 4.45E-02 | 7.11E-01 | 4.53E-02 | 7.25E-01 |
 |  |  |  | S noMut vs N | 1.16 (1.00-1.35) | 4.75E-02 | 7.61E-01 | 4.82E-02 | 7.71E-01 |