Skip to main content

Table 4 qPCR expression values for the selected 15 genes

From: Molecular fingerprinting reflects different histotypes and brain region in low grade gliomas

Gene name

Supratentorial

Infratentorial

ΔCt median

I. vs.S.

 

ΔCt

2-ΔΔCt

ΔCt

2-ΔΔCt

 

p-value

ABBA1

2.19

1.46

2.88

0.9

2.72

-

APOD

-1.33

0.69

-2.46

1.6

-1.87

-

ARX

6.03

2.46

8.25

0.53

7.33

0.03

CXCL14

0.84

12.61

7.17

0.18

4.5

0.009

FOSB

4.15

0.98

3.84

1.27

4.11

-

FOXG1

4.65

0.7

3.38

1.69

4.14

-

GPR17

2.85

1.52

8.18

0.04

3.43

0.0049

LHX2

4.6

7.59

9.04

0.35

7.52

0.01

NRXN2

6.28

1.18

6.52

0.99

6.51

-

PTGD2S

1.34

1.66

5.4

0.1

2.08

0.0049

SDC3

2.9

0.94

1.79

2.03

2.81

-

SNX22

6.98

0.73

6.34

1.11

6.5

-

SPOCK1

3.99

0.88

3.06

1.69

3.81

-

TIMP4

2.62

0.92

2.42

1.05

2.48

-

ZFHX4

-0.43

0.85

-0.84

1

-0.84

-

  1. qPCR values for dataset 1 (34 samples) and 2 (18 samples). Gene expressions were significantly different for all listed genes by multivariate analysis (RLS). The genes in bold are those passing the Mann–Whitney test (only its significant p-values are reported on the right column). S: Supratentorial, I: Infratentorial.
Back to article page

BMC Cancer

ISSN: 1471-2407

Contact us