Skip to main content

Table 2 Infratentorial vs Supratentorial LGGs: selected genes by l1l2

From: Molecular fingerprinting reflects different histotypes and brain region in low grade gliomas

Gene

f.s.

Gene

f.s.

Gene

f.s.

Gene

f.s.

Gene

f.s.

ABBA1

100

KIAA2022

100

KIAA1189

98

RHOB

92

ZNF228

78

ADRBK2

100

NRGN

100

KLHDC8A

98

RORB

92

LTB4DH

75

ALK

100

PAX3

100

LRAP

98

SCG2

92

TMEPAI

75

AMMECR1

100

PCDH8

100

MAN2A1

98

SLC10A4

92

BMS1P5

72

ANKRD10

100

PCDHB16

100

NEFH

98

SNRPN

92

KIAA1967

72

APOD

100

PCNX

100

NHSL1

98

SOX4

92

KRAS

72

ARRB1

100

PDGFRA

100

NOS1

98

SPRN

92

MNDA

72

ARX

100

PKIB

100

NR4A1

98

TOB1

92

CUL4A

70

ATP6V0E1

100

PPM1E

100

PLK2

98

AKAP11

90

NRXN2

70

ATXN3

100

PPP1R9A

100

POLR2J2

98

FCF1

90

VSNL1

70

BICD1

100

PRO1073

100

POSTN

98

GFAP

90

  

RBM15

100

RARRES1

100

PSD3

98

GPR98

90

  

C1QL1

100

RASGRP1

100

RPS11

98

MAP4K4

90

  

CAPN3

100

RCOR1

100

SPAG9

98

RAB27B

90

  

CCDC76

100

RGS4

100

SPATA18

98

SHC4

90

  

CD24

100

RRM2

100

SPOCK1

98

VAMP1

90

  

CHAD

100

SDC3

100

STON2

98

CRYAB

88

  

CNIH3

100

SHROOM3

100

TMEM158

98

DOCK9

88

  

COCH

100

SLC35A3

100

TSPAN5

98

FAM149A

88

  

COG5

100

SMA4

100

ZC3H7A

98

FNDC3B

88

  

CREB5

100

SMOC1

100

ADARB1

95

FOSB

88

  

CTGLF1

100

SNX21

100

CAMK2N1

95

N4BP2

88

  

CX3CR1

100

SOX10

100

CAMKK2

95

NUCKS1

88

  

CXCL14

100

STMN2

100

CDC2L5

95

RPL37A

88

  

CYR61

100

STXBP6

100

COL22A1

95

SST

88

  

ENC1

100

SUSD5

100

GLTSCR2

95

ZNF226

88

  

EPHX1

100

TIMP4

100

GPNMB

95

GRM3

85

  

F2RL1

100

TMTC4

100

GRIA4

95

KIAA1919

85

  

FBXL3

100

TNFAIP6

100

LRRFIP1

95

PGM2L1

85

  

FNDC1

100

TRPM3

100

LYZ

95

PTPRC

85

  

FOS

100

U2AF1

100

NANOG

95

CCL4

82

  

FOXG1

100

ZFHX4

100

OLFM2

95

CUL2

82

  

FZD7

100

ZFP36

100

OPA1

95

FBXL11

82

  

GADD45B

100

ZNF207

100

PHCA

95

GARNL4

82

  

GNL3L

100

ZNF294

100

PKP4

95

LCMT2

82

  

GUCY1A3

100

ADRB1

98

PLEKHA2

95

TMEM132E

82

  

HINT3

100

ALDOC

98

PMP2

95

TYMS

82

  

HS3ST3B1

100

ANKRD22

98

PPP2R5C

95

GGNBP2

80

  

ID4

100

ATM

98

WIF1

95

IL8

80

  

IRX2

100

CCDC91

98

ASCL1

92

PLA2G2A

80

  

KIAA0101

100

CLEC4A

98

AZGP1

92

PMS2L5

80

  

KRIT1

100

COL9A2

98

F11R

92

S100A1

80

  

LHX2

100

ENPP2

98

FZD8

92

SEZ6L

80

  

MBP

100

FAM107B

98

LCAT

92

ZNF423

80

  

MICAL2

100

FAM89A

98

LMO2

92

EPHA5

78

  

NAIP

100

FRMD4A

98

MIAT

92

GPBP1L1

78

  

NCOA3

100

GALNT13

98

NEFM

92

MCTP1

78

  

NEFL

100

GAS7

98

PPP1CB

92

PTPN5

78

  

NR2E1

100

GPR17

98

PTGD2S

92

STMN4

78

  
  1. List of 206 gene symbols selected by the l1l2 procedure. For each Gene ID we report the highest frequency score. We share 14 genes, showed in bold, with the results reported by previous studies [9, 19, 20].