From: Genetic polymorphisms of DNA double-strand break repair pathway genes and glioma susceptibility
Genotype | Cases, n(%) | Controls, n(%) | OR (95% CI)a | P trend b | P value for HWE test |
---|---|---|---|---|---|
XRCC3: rs861539 (T241M) | |||||
CC | 336 (87.5) | 340 (88.5) | 1.00 | 0.835 | 0.165 |
CT | 47 (12.2) | 41 (10.7) | 1.15 (0.73-1.79) | Â | Â |
TT | 1 (0.3) | 3 (0.8) | 0.33 (0.03-3.22) | Â | Â |
XRCC3: rs1799794 (−4541G>A) | |||||
GG | 100 (26.0) | 108 (28.1) | 1.00 | 0.838 | 0.271 |
GA | 201 (52.4) | 181 (47.1) | 1.09 (0.78-1.53) | Â | Â |
AA | 83 (21.6) | 95 (24.8) | 0.86 (0.57-1.28) | Â | Â |
XRCC3: rs1799796 (A17893G) | |||||
AA | 178 (46.4) | 171 (44.5) | 1.00 | 0.231 | 0.406 |
AT | 173 (45.0) | 165 (43.0) | 0.97 (0.72-1.31) | Â | Â |
TT | 33 (8.6) | 48 (12.5) | 0.64 (0.39-1.04) | Â | Â |
BRCA2: rs1799943 (−26G>A) | |||||
GG | 158 (41.2) | 180 (46.9) | 1.00 | 0.149 | 0.722 |
GA | 186 (48.4) | 168 (43.7) | 1.22 (0.90-1.64) | Â | Â |
AA | 40 (10.4) | 36 (9.4) | 1.22 (0.74-2.01) | Â | Â |
BRCA2: rs15869 (3' UTR) | |||||
AA | 213 (55.5) | 220 (57.3) | 1.00 | 0.646 | 0.375 |
AC | 143 (37.2) | 137 (35.7) | 1.05 (0.78-1.42) | Â | Â |
CC | 28 (7.3) | 27 (7.0) | 1.04 (0.59-1.83) | Â | Â |
RAG1: rs2227973 (R820K) | |||||
GG | 129 (33.6) | 134 (34.9) | 1.00 | 1.000 | 0.586 |
GA | 200 (52.1) | 190 (49.5) | 0.96 (0.70-1.30) | Â | Â |
AA | 55 (14.3) | 60 (15.6) | 0.83 (0.54-1.29) | Â | Â |
XRCC5: rs1051685 (3' UTR) | |||||
AA | 313 (81.5) | 326 (84.9) | 1.00 | 0.232 | 0.808 |
AG | 69 (18.0) | 56 (14.6) | 1.24 (0.84-1.82) | Â | Â |
GG | 2 (0.5) | 2 (0.5) | 1.00 (0.37-2.68) | Â | Â |
LIG4: rs1805388 (T9I) | |||||
CC | 163 (42.4) | 222 (57.8) | 1.00 | < 0.001 | 0.659 |
CT | 172 (44.8) | 142 (37.0) | 1.62 (1.20-2.18) | Â | Â |
TT | 49 (12.8) | 20 (5.2) | 3.27 (1.87-5.71) | Â | Â |
XRCC4: rs1805377 (Splice Site) | |||||
AA | 179 (46.6) | 195 (50.8) | 1.00 | 0.030 | 0.454 |
AG | 143 (37.2) | 153 (39.8) | 0.96 (0.71-1.30) | Â | Â |
GG | 62 (16.2) | 36 (9.4) | 1.77 (1.12-2.80) | Â | Â |
ATM: rs189037 (−111G/A) | |||||
GG | 140 (36.5) | 125 (32.5) | 1.00 | 0.487 | 0.070 |
GA | 186 (48.4) | 203 (52.9) | 0.78 (0.57-1.07) | Â | Â |
AA | 58 (15.1) | 56 (14.6) | 0.88 (0.57-1.37) | Â | Â |