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Table 3 Genotypic analyses of all the SNPs studied and their association with MM susceptibility in Spanish population

From: Genetic variants in PARP1 (rs3219090) and IRF4(rs12203592) genes associated with melanoma susceptibility in a Spanish population

Gene

SNP

Controls N (%)

Cases N (%)

Association

Major homozygotes

Heterozygotes

Minor homozygotes

Major homozygotes

Heterozygotes

Minor homozygotes

OR (CI 95%)

p-value

PARP1

rs3219090

149 (46.4)

133 (41.4)

39 (12.1)

255 (53.2)

184 (38.4)

40 (8.3)

0.79 (0.63-0.97)

0.027

ATM

rs1801516

232 (74.6)

68 (21.0)

11 (3.5)

349 (77.7)

91 (20.3)

9 (2)

0.83 (0.62-1.11)

0.203

CASP8

rs13016963

112 (34.3)

158 (48.5)

56 (17.2)

174 (35.5)

241 (49.2)

75 (15.3)

0.94 (0.77-1.15)

0.539

MX2

rs45430

123 (38.3)

152 (47.3)

46 (14.3)

180 (37.6)

221 (46.2)

77 (16.1)

1.05 (0.86-1.29)

0.627

CCND1

rs1485993

93 (29.5)

162 (51.4)

60 (19.1)

143 (30.7)

237 (51)

85 (18.3)

0.96 (0.78-1.18)

0.691

IRF4

rs12203592

242 (70.1)

101 (29.3)

2 (0.6)

398 (74)

121 (22.5)

19 (3.5)

0.97 (0.74-1.26)

0.801

CYP2R1

rs10741657

123 (40.6)

131 (43.2)

49 (16.2)

172 (38.1)

214 (47.4)

65 (14.4)

1.01 (0.82-1.25)

0.893

NADSYN1

rs7944926

138 (43)

138 (43)

45 (14)

210 (45.5)

195 (42.3)

56 (12.1)

0.91 (0.74-1.12)

0.380

NADSYN1

rs12785878

130 (39.3)

157 (47.4)

44 (13.3)

211 (45.9)

194 (42.2)

55 (11.9)

0.84 (0.68-1.04)

0.106

  1. Bold indicates statistically significant results.
  2. N refers to the count of individuals, percentages among the total are indicated between parentheses.
  3. OR (CI95%) means Odds Ratio and its 95% Confidence Interval.
  4. P-values are calculated via unconditional logistic regression, taking into account the codominant model.