From: Identification of epigenetically regulated genes that predict patient outcome in neuroblastoma
Symbol | Chr | Role | Methylated in other cancers | Comment |
---|---|---|---|---|
DHRS3 | 1p36 | Short-chain dehydrogenases/reductase | Melanoma cell lines [17] | Enzyme involved in retinol metabolism. Putative TSG, crucial for the development of neural crest cells, located in NB SRO of deletions [16, 18]. Recently reported as one of three candidate genes that were significantly overexpressed in favorable NB [19]. |
DUSP23 | 1q23 | Dual-specificity protein phosphatase | Role in mitogenic signalling & cell cycle control. Fetal expression - possible role in early development [25, 26]. | |
TGFBI | 5q31 | Extracellular matrix protein | Leukemia, renal cell-, lung-, esophageal cancer [24] | Involved in cell adhesion and tumorigenesis [14, 15]. Reduces proliferation and invasion in vitro and in vivo in NB. The mRNA expression of TGFBI is inversely correlated to MYCN expression in NB [19]. |
COL1A2 | 7q22 | Type I collagen | Medulloblastoma, colorectal- breast- and bladder cancer, melanoma [13, 21, 23, 29] | Tumors that secrete the gene have low tumorigeneic potential [27]. |
PRKCDBP | 11p15 | Protein kinase binding | Breast-, lung-, ovarian- and gastric cancer, glioblastoma multiforme [20, 31, 35–37] | Also called hSRBC. Putative TSG. |
SCNN1A | 12p13 | Ion transport | Breast cancer [22] | Contributes to methylator phenotype in breast cancer [22]. |
POU2F2 | 19q13 | Transcription factor | Regulator of neuronal differentiation [34]. | |
KRT19 | 17q21 | Intermediate filament protein | Renal cell carcinoma [30] | Involved in cell migration, invasion and metastasis [28]. Used as biomarker for detection of disseminated tumor cells [33]. Low expression in MNA NB [32]. |